Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11- 03] 14 sequences; 27,530,324 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq3 102 3e-16 >seq3 Length=3024150 Score = 102 bits (112), Expect = 3e-16 Identities = 117/156 (75%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 443706 GAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTC 443765 |||||| ||||||| || || | || || || | || || ||| |||| ||||| Sbjct 1896773 GAGCGATTAGTCGCCTTCGCCGCTGTGGAGGGCATTTTCTTCTCCGGTT-CTTTCGCCTC 1896715 Query 443766 CATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGAT 443825 |||||||||||||| |||||||| || |||| || || ||||| || ||||| || Sbjct 1896714 AATCTTCTGGTTGAAGAAGCGTGGCCTCATGCCTGGACTCACCTTCTCCAATGAACTCAT 1896655 Query 443826 CAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861 |||||| |||||||| ||||| ||||||||| || Sbjct 1896654 CAGTCGTGACGAGGGAATGCATACCGACTTCGCATG 1896619 Score = 91.5 bits (100), Expect = 5e-13 Identities = 111/150 (74%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 443715 GTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTG 443774 || || || || | ||| ||||| | || || ||| | |||| || || |||||||| Sbjct 1898796 GTAGCGTTCGCGGCGGTAGAAGGGATCTTCTTCTCCGG-ATCTTTTGCTTCAATCTTCTG 1898854 Query 443775 GTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGA 443834 | |||| || || || || |||| ||| | |||||| |||||||||||| |||||||| Sbjct 1898855 GCTGAAGAAACGAGGTCTCATGCCTGGTTTAACCTTTTCTAACGAACTGATTAGTCGGGA 1898914 Query 443835 CGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864 ||| || ||||| || || |||||||| Sbjct 1898915 CGAAGGGATGCATACAGATTTTGCCTGTCT 1898944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335715092230