Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11-
03] 14 sequences; 27,530,324 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq9 87.8 2e-12
seq3 84.2 3e-11
>seq9
Length=1678725
Score = 87.8 bits (96), Expect = 2e-12
Identities = 107/145 (74%), Gaps = 6/145 (4%)
Strand=Plus/Plus
Query 182696 TTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCAAC 182755
|||||||||||||||||| || || ||| ||| || || |||||| | ||||||||
Sbjct 1435899 TTTACCGCGAAGTGGGAAGACTCCAAAGTTATCGCGCCCGACGACACCCAATCCCGCAAC 1435958
Query 182756 CGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGAT---TG 182812
|| |||| || || ||||| || || |||| ||| |||||||| || |||| |
Sbjct 1435959 AGCAAGGGCCTTGGCAGAATCTCCTTCAGTGAGAATAAGAGTACATTT---AGATGCATT 1436015
Query 182813 TGCCGTACCCGCCTTGTTCGCGTCA 182837
||| || || ||||||||||||
Sbjct 1436016 CCTCGTCCCAGCGTTGTTCGCGTCA 1436040
>seq3
Length=3024150
Score = 84.2 bits (92), Expect = 3e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 122692 ATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATA 122751
|| |||||||| |||||| || || |||||||| || |||||||||||||| | ||
Sbjct 1896655 ATGAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGGCCACGCTTCTTCAACCAGAAGATT 1896714
Query 122752 GCGCAGAATGACCCGGAGAAGAAGATACCCTCCACA 122787
| | ||| || ||||||||||| || |||||||||
Sbjct 1896715 GAGGCGAAAGAACCGGAGAAGAAAATGCCCTCCACA 1896750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031890094400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |