Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11- 03] 14 sequences; 27,530,324 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 >seq6 Length=2129081 Score = 107 bits (118), Expect = 2e-18 Identities = 207/300 (69%), Gaps = 8/300 (3%) Strand=Plus/Plus Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC--- 30175 |||||||| |||| || |||||| || | ||| |||||| |||| ||| | | Sbjct 2103334 GGGTTCCAAGCGCTCAAGATGATTCGGCGGTCAG-TGGGTTCCTCCT--TGATCTTCCGA 2103390 Query 30176 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TGCCCTCATGTCCGTGTA 30234 | | | | | | || |||||||| ||| || | ||||| | | || ||| || Sbjct 2103391 ATGACCTCTCGGAGTTGATCCACGCCCTCTCCGGTATAGTCCTTTTCGCAA-TCCACATA 2103449 Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294 || || || |||||||||||||| ||||||||||| || ||||| ||||| || || Sbjct 2103450 CTTCGCACCAAAATGCCTCCACTGAAACCCGTACACAGGACCCAGATCTCCTTCCCGTCT 2103509 Query 30295 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30354 ||| ||| || | ||| || ||||| || | || || || ||||||| || || || Sbjct 2103510 GTGACCGAGCCCTCGCTTCTCTAAAAATTCCTTTGACCCATTCCCGTCCCAAATTTTCAC 2103569 Query 30355 CCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30414 |||||| ||||| |||||| ||||| ||| | || ||||| || ||||| || Sbjct 2103570 GGCCTTCTTTGAGAGAATAGTGGAGTCCGTGGAGCCTTTCACAAACCAGAGAAGCTCTTC 2103629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310330673288