Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11-
03] 14 sequences; 27,530,324 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq6 174 4e-38
seq1 172 1e-37
seq8 89.7 1e-12
>seq6
Length=2129081
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968
|| ||||| || ||||| || ||||||||||| |||| |||||| | || || || |||
Sbjct 299640 AGATGAAGGGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGC 299581
Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028
|||||||| |||||||| | || || ||||| || || | ||| ||||||||||| |||
Sbjct 299580 TGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATC 299521
Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088
|| |||||||| ||||||||||| || || |||||||| ||||||||||| ||
Sbjct 299520 TTCGCCTTCACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCA 299461
Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || | ||||||
Sbjct 299460 GTGAGGGTCTTCACGAAGATCTGCAT 299435
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968
|| |||||||| ||||| || ||||| || || |||| ||| || | |||||| || ||
Sbjct 300435 AGATGAAGAGTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGT 300376
Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028
|||||||| ||||| || ||||| || |||||||| || | || ||||||||||| |||
Sbjct 300375 TGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATC 300316
Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088
||| |||||||| ||||| |||||||| || |||||||| ||||||||||| ||
Sbjct 300315 TTTGCCTTCACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCA 300256
Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || | ||||||
Sbjct 300255 GTCAGGGTCTTGACGAAGATCTGCAT 300230
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966
|||||||||| ||| ||| || ||||| || || || | ||||| | || || || |
Sbjct 300713 CAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGA 300654
Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026
|||||||||| ||||| || ||||| || ||||| ||||||| |||||||||||||| |
Sbjct 300653 GCTGCTTGCCCGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAA 300594
Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086
|||| || || || ||||| ||||| || || ||||| || ||||| ||||| |
Sbjct 300593 TCTTCGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCCAGCGTGATTGTCTTAC 300534
Query 211087 CCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||||| ||||| ||||| | |||||||
Sbjct 300533 CCGTGAGGGTCTTGACAAAGATCTGCATT 300505
Score = 159 bits (176), Expect = 8e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || || ||||| || || |||||||| || | |||||| | || || || ||||||
Sbjct 299922 TGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCCTCGAGCTGC 299863
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
||||| |||||||| | ||| || |||||||| || | || |||||||||||||||||
Sbjct 299862 TTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 299803
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
|| ||||| ||||| |||||||| || |||||||| |||||||||||||| ||
Sbjct 299802 GCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCAGTC 299743
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
| ||||| || || | ||||||
Sbjct 299742 AACGTCTTCACGAAGATCTGCAT 299720
Score = 158 bits (174), Expect = 3e-33
Identities = 170/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | ||||| || || | |||||||| || || |||||||| || | |||
Sbjct 300226 TCCACGTAGACGAAGGACGAGATGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGAAAG 300167
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|| | || ||||| ||||||||||| |||||||| | ||| || ||||| || ||||
Sbjct 300166 AGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAAT 300107
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| ||||| || || ||||| |||||||| ||||| |||||||| || |||||
Sbjct 300106 GCCCTCCTTATCTTGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTC 300047
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || |||||||| |||||||| ||||| || || | |||||
Sbjct 300046 GAGCGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 300002
>seq1
Length=3320137
Score = 172 bits (190), Expect = 1e-37
Identities = 163/208 (78%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966
||||||| | ||| |||||||| || || || ||||| | || || | ||||| ||||
Sbjct 2298604 CAAGGTGCAAAGTAGACTCTTTCTGAATATTGTAATCGGAGAGAGTTCGCCCATCCTCCA 2298545
Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026
|||||| || |||||||| | ||||| ||||| ||||||| |||||||||||||| |
Sbjct 2298544 ACTGCTTTCCAGCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAA 2298485
Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086
|||| |||||||| || || ||||| || || |||||||||||||||||||| |
Sbjct 2298484 TCTTCGCCTTCACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCC 2298425
Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||| | ||||||||| || | ||||||
Sbjct 2298424 CCGTCAAAGTCTTTACGAAAATCTGCAT 2298397
Score = 165 bits (182), Expect = 2e-35
Identities = 169/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | |||||||||||||| || ||||| || |||||||| || || | |||||||
Sbjct 2298902 CGAAGACGGAGGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTC 2298843
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| || ||||||||||| || || |||||||| ||||| || || || | ||
Sbjct 2298842 CGGCCATCCTCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCC 2298783
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| ||||||||||| ||| || || ||||| ||||| || || ||||| |
Sbjct 2298782 TCCTTATCCTGGATCTTCGCTTTGACATTATCGATTGTGTCGGACGACTCGACCTCCAAG 2298723
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || || || || ||||| | ||||||
Sbjct 2298722 GTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 2298682
Score = 145 bits (160), Expect = 2e-29
Identities = 157/208 (75%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966
|||||||||| || ||||| || ||||| || ||||| | ||| || | ||||| || |
Sbjct 2298322 CAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCGGAAAGCGTGCGCCCATCCTCAA 2298263
Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026
|||| || || ||||||||||| || || ||||| ||||| | || ||||||||||| |
Sbjct 2298262 GCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAA 2298203
Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086
|||| || || || ||||| ||||| || || || || |||||||| ||||| |
Sbjct 2298202 TCTTCGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGC 2298143
Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||| | ||||| || || | ||||||
Sbjct 2298142 CCGTCAATGTCTTGACGAAGATCTGCAT 2298115
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968
|| || || ||| |||||| || ||||| ||||||| ||| || | || || ||||
Sbjct 2299115 AGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCAAT 2299056
Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028
|||||||| || || || |||||||| ||||| || || | ||||||||||| || |||
Sbjct 2299055 TGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATC 2298996
Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088
|| ||||| || ||||| ||||| || || ||||| | ||||| ||||| ||
Sbjct 2298995 TTCGCCTTCACATTATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATTGTCTTGCCT 2298936
Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || | ||||||
Sbjct 2298935 GTGAGGGTCTTGACGAAGATCTGCAT 2298910
Score = 113 bits (124), Expect = 1e-19
Identities = 89/107 (83%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||||||||||||||| ||| ||||| |||||||||||||| || |||||
Sbjct 675793 CCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCA 675852
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||||||||| |||||||| ||||| || || | |||||||||
Sbjct 675853 AGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATTTT 675899
Score = 93.3 bits (102), Expect = 1e-13
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||||||||| ||||| || |||||||| || || || |||| |||||
Sbjct 675624 AGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTCCGGCCATCC 675683
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006
|| ||||||||||| |||||||| ||||| || || ||||| ||
Sbjct 675684 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCAGGGGG 675727
>seq8
Length=1850677
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || || ||||| ||||||||||||||||| ||||| | || |||
Sbjct 435849 AGGACAAGGTGGAGGGTAGACTCCTTTTGGATGTTATAATCGCTGAGGGTGCGACCGTCT 435908
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006
|| |||||||| || || || || ||||| || ||||| || ||
Sbjct 435909 TCGAGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGGTCGGGTGG 435952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151792077110
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