Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457915.1_202015- 11-03] 14 sequences; 26,374,274 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq6 127 5e-24 seq1 123 6e-23 seq8 84.2 5e-11 >seq6 Length=2246423 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || || |||||||||||||| |||| |||||||| | | ||| | |||||| || || Sbjct 330418 AGATGAAGAGTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGT 330359 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| |||||||| ||||| ||||||||||| || || || || ||||||||| Sbjct 330358 TGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATC 330299 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 ||| ||||||| |||| ||||| | | || || || | |||||||||||| || Sbjct 330298 TTTGCCTTCACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCG 330239 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || Sbjct 330238 GTCAGGGTCTTGACGAAGATCTG 330216 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || || |||||||||||||| |||| ||| ||||| | | || | || || || ||| Sbjct 329621 AGATGAAGAGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGC 329562 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| || ||||| || | |||||||||||| || |||||||| ||||||||| Sbjct 329561 TGCTTGCCCGCGAAAATCAAACGCTGCTGGTCGGGGGGGATTCCTTCCTTGTCCTGAATC 329502 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || ||| ||| |||| |||||| | | || || || | ||||||||||| || Sbjct 329501 TTCGCCTTGACGTTATCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATCGTCTTCCCA 329442 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 ||||| || |||||||| || || Sbjct 329441 GTGAGGGTCTTCACAAAGATCTG 329419 Score = 122 bits (134), Expect = 2e-22 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 ||||||| || || |||||| |||| |||||||||| || || | || || || | Sbjct 330696 CAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGA 330637 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| || || || ||||| ||||||||||| ||| ||| ||||| ||||||| Sbjct 330636 GCTGCTTGCCCGCAAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAA 330577 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| || |||| ||||| | | || || || | |||||| ||||||| Sbjct 330576 TCTTCGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATTGTCTTAC 330517 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||| || || ||||| || || Sbjct 330516 CCGTGAGGGTCTTGACAAAGATCTG 330492 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || | || |||||||| |||| ||| ||||| | | ||| | || || Sbjct 330196 AGGACGAGATGCAAGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTCC 330137 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | |||||||||||||| ||| || || || Sbjct 330136 TCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCT 330077 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| ||||| | | || || || | ||| |||||| Sbjct 330076 TGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTC 330017 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || |||||||| Sbjct 330016 TTGCCCGTGAGGGTCTTGACGAAAATTTG 329988 Score = 104 bits (114), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| ||||||||||| || | ||| ||||||| | || | || ||||| |||||| Sbjct 329905 TGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCTTCGAGCTGC 329846 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || |||||||| | ||||||||||| || || || || ||||| ||||| Sbjct 329845 TTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 329786 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| |||| ||||| | || || || || | |||||||||||| || || Sbjct 329785 GCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCAGTC 329726 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | || ||||| || || || Sbjct 329725 AACGTCTTCACGAAGATCTG 329706 >seq1 Length=3243340 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||| |||||||||||||| |||| ||||||||| | | ||| Sbjct 2261077 CGAAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTC 2261018 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || || || || || ||||| || ||||| || || Sbjct 2261017 CGGCCATCCTCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCC 2260958 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || || |||| ||||| | | || || ||||| Sbjct 2260957 TCCTTATCCTGGATCTTCGCTTTGACATTATCGATTGTGTCGGACGACTCGACCTCCAAG 2260898 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || ||||||||||| || || Sbjct 2260897 GTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTG 2260860 Score = 113 bits (124), Expect = 1e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 ||||||| ||||| ||||| || || | |||||| || | | ||| | ||||| |||| Sbjct 2260779 CAAGGTGCAGAGTAGACTCTTTCTGAATGTTGTAATCGGAGAGAGTTCGCCCATCCTCCA 2260720 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||||| |||||||| | || |||||||| ||| ||| ||||| ||||||| Sbjct 2260719 ACTGCTTTCCAGCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAA 2260660 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||||||| || | ||||| | | || || || | ||||||||||| | Sbjct 2260659 TCTTCGCCTTCACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCC 2260600 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || | || || || ||||| || Sbjct 2260599 CTGTCAAGGTCTTTACGAAAATCTG 2260575 Score = 102 bits (112), Expect = 2e-16 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || ||| || ||||||||||| ||||| |||| ||||||||||| ||| || Sbjct 2260284 CGGAGGCGCAAGACGAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCAGACAATGTA 2260225 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 | ||||| || ||||| ||||| ||||| |||||||| || ||||| ||| Sbjct 2260224 CGGCCATCCTCGAGCTGTTTTCCAGCGAAAATGAGACGTTGTTGGTCGGGA 2260174 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| |||||||||||||| |||| |||||||| || |||| ||||| Sbjct 639921 AGGACCAGGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCGCTCAGTGTCCGGCCATCC 639980 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || ||||||||||| |||||||| || || Sbjct 639981 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCAGG 640021 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| || || || |||||||| |||| ||||| |||| | || | ||||| || | Sbjct 2260499 CAAGATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTCAA 2260440 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 |||| || || |||||||| |||||||||||||| ||| || || || ||||||| Sbjct 2260439 GCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAA 2260380 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| || |||| ||||| | | || || || | ||||| ||||| | Sbjct 2260379 TCTTCGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGC 2260320 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 |||| | || || || || || || Sbjct 2260319 CCGTCAATGTCTTGACGAAGATCTG 2260295 Score = 93.3 bits (102), Expect = 1e-13 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 |||||||| |||||||||||||| ||||| | ||| | ||||||||||| | |||||| Sbjct 2260701 ATCTTCGCTGGAAAGCAGTTGGAGGATGGGCGAACTCTCTCCGATTACAACATTCAGAAA 2260760 Query 200998 GAGTCTACTCTTCACCTTG 201016 ||||||||||| ||||||| Sbjct 2260761 GAGTCTACTCTGCACCTTG 2260779 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || ||||| || ||| || || | |||||| || | | || | || || |||| Sbjct 2261290 AGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCAAT 2261231 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| || || || || || || ||||||||||| || ||||| || |||||| Sbjct 2261230 TGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATC 2261171 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || |||||| |||| ||||| | | ||||| ||||||||||||||||| || Sbjct 2261170 TTCGCCTTCACATTATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATCGTCTTGCCT 2261111 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || || Sbjct 2261110 GTGAGGGTCTTGACGAAGATCTG 2261088 >seq8 Length=1775491 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || ||||| ||||||| ||| || || | || | || ||| Sbjct 390982 AGGACAAGGTGGAGGGTAGACTCTTTTTGGATGTTATAATCGCTGAGGGTGCGACCGTCT 391041 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||||||||| || || || ||||||||||| || Sbjct 391042 TCGAGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGGTCGGG 391082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921388530938