Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457915.1_202015- 11-03] 14 sequences; 26,374,274 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 205 1e-47 >seq2 Length=2778437 Score = 205 bits (226), Expect = 1e-47 Identities = 257/353 (73%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || || || || ||||| || |||||||| Sbjct 1449002 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCAGCAGTGGCCTTGACCTCGAAGATACCC 1448943 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | || ||||| || || || || || || || || ||||| ||| Sbjct 1448942 TCCTCGATGGTAAGAAGTGACACATCGAAAGTTCCTCCTCCGAGATCGAAGATGAGGACG 1448883 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| || ||||| |||||||||||||| || || || || || || || Sbjct 1448882 TTGCGCTCGCCGGTCACCTTCTTGTCGAGACCGTACGCAATGGCGGCAGCGGTGGGCTCG 1448823 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || |||||||| ||||| || | ||| ||| | || || || || || || || Sbjct 1448822 TTGATGATACGAAGGATGTTCATTCCGGAAATGGTTCCGGCGTCCTTGGTAGCCTGGCGC 1448763 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||||||||| || |||||||| ||||| |||| |||||| || | ||||| Sbjct 1448762 TGCGAGTCGTTAAAGTACGCGGGGACCGTCACGACGGCGTTCGTGACGGTCGTGCCGAGG 1448703 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || ||| | || ||||| || ||||||||||| || |||||||| Sbjct 1448702 TAGGACTCAGCGGTCTCCTTCATCTTCAAGAGAACCATCGAGGAGATCTCTTC 1448650 Score = 140 bits (154), Expect = 4e-28 Identities = 267/388 (69%), Gaps = 8/388 (2%) Strand=Plus/Plus Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398 ||| ||||| || |||||||| || | | || || || || ||||| |||| | | Sbjct 783831 CGTGCGCTTGGCACGCTCACAAGCGCTCCTCAATCGCCGGAGCGCACGAGGGTCGTCCGC 783890 Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAG-GAGTCTCGAA 7456 || || ||| || || | ||||| | |||||| || ||| | || | | Sbjct 783891 GATGTCGAGCTTCGTCTTGCGCTGGAACTCCTTCTTGAAGTGCTCCAAGAGGGTGTTG-- 783948 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || ||||| || ||||| | |||| ||| Sbjct 783949 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTAGCCTTGACGGCGAAGACACCG 784008 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||||| | | ||| ||||| || || || ||||| || || || ||||| ||| Sbjct 784009 CCGCTGATGTTGAGGAGCGAGACATCGAAGGTTCCTCCACCGAGATCGAAGATGAGGACG 784068 Query 7577 TTCGTATCGTCGTCTTTG--TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || ||| ||||| | | || ||||||||||| ||||| || || || || || | Sbjct 784069 TTGCGCTCG--GTCTTCGATTGCTGGTCGAGACCGTATGCGATGGCGGCGGCGGTGGGCT 784126 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || || ||||| || || ||||||||||| | | || || || ||||| | | Sbjct 784127 CGTTGATGATACGGAGCACGTCGAGGCCAGCAATGGCGCCGGCGTCCTTGGTCGCGAGAC 784186 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 | ||||| ||||| |||||||| || || Sbjct 784187 GCTGCGAGTCGTTGAAGTAGGCAGGAAC 784214 Score = 93.3 bits (102), Expect = 5e-14 Identities = 112/152 (74%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| |||||||||| || |||||||| || || || ||||||||||| || Sbjct 1448383 GTGTTGATGGGGTTCATCGCCACCTGGTTCTTTGCGGCATCACCGATAAGACGCTC---G 1448327 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 || || | || | ||| || || || ||||| || || || || |||||||| || || Sbjct 1448326 TTGTCGGAGAAGGAGACATATGAGGGAGTCGTGCGGTTACCCTGATCGTTCGCGATGATC 1448267 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || |||||||| ||||| || || ||||| Sbjct 1448266 TCGACACGGTCGTTCTGCCACACACCCACGCA 1448235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132688851760