Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457915.1_202015- 11-03] 14 sequences; 26,374,274 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 >seq6 Length=2246423 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 30160 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30219 |||| || || |||||||||||||| ||||||||||| || ||||| ||||| || Sbjct 2204210 TACTTCGCACCAAAATGCCTCCACTGAAACCCGTACACAGGACCCAGATCTCCTTCCCGT 2204269 Query 30220 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30279 ||||| ||| || | ||| || ||||| || | || || || ||||||| || || Sbjct 2204270 CTGTGACCGAGCCCTCGCTTCTCTAAAAATTCCTTTGACCCATTCCCGTCCCAAATTTTC 2204329 Query 30280 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30339 || |||||| ||||| |||||| ||| || ||| | || ||||| || ||||| Sbjct 2204330 ACGGCCTTCTTCGAGAGAATAGTGGAGTCTGTAGAGCCTTTCACAAACCAGAGAAGCTCT 2204389 Query 30340 TC 30341 || Sbjct 2204390 TC 2204391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617530279622