Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457915.1_202015- 11-03] 14 sequences; 26,374,274 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq6 123 2e-23 seq1 114 8e-21 >seq6 Length=2246423 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || |||||||| || |||| |||| || |||||||| |||||||| Sbjct 330404 CTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCGGCGAA 330345 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || || |||||||| |||| | ||||||||||| | || ||| || ||| Sbjct 330344 AATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTTGCCTTCACGTT 330285 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| ||| | |||||| || | || || ||||| || || |||||||| || Sbjct 330284 GTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 330225 Query 34966 AAAGATCTGCATG 34978 |||||||||||| Sbjct 330224 GAAGATCTGCATG 330212 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||||||||||||||| || || ||||| || ||| |||| | || || || Sbjct 330694 AGGTGAAGGGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGAGC 330635 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || || || || || || |||||||| | || | ||| |||||||| | || Sbjct 330634 TGCTTGCCCGCAAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATC 330575 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || ||||| | |||| || | |||||| || | || || ||||| ||| Sbjct 330574 TTCGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATTGTCTTACCC 330515 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||||||| |||||||||||||| Sbjct 330514 GTGAGGGTCTTGACAAAGATCTGCAT 330489 Score = 120 bits (132), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| |||||||||||||| ||| |||| | || || || ||||| || ||||| Sbjct 329607 CTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 329548 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || |||||||| | || | || |||||||| | || || ||||| Sbjct 329547 AATCAAACGCTGCTGGTCGGGGGGGATTCCTTCCTTGTCCTGAATCTTCGCCTTGAC--- 329491 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | ||||||| || | ||| || |||| ||| || ||||| || |||||||||| Sbjct 329490 -GTTATCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATCGTCTTCCCAGTGAGGGTCT 329432 Query 34962 TTACAAAGATCTGCATG 34978 | ||||||||||||||| Sbjct 329431 TCACAAAGATCTGCATG 329415 Score = 114 bits (126), Expect = 8e-21 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||||||||| || ||| |||| | || || || ||||| || ||||| Sbjct 329894 CTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAA 329835 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || |||||||| | || | ||||||||||| | || || |||||| Sbjct 329834 GATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 329775 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| ||| | ||| || || | || || |||||||| || | ||||| || Sbjct 329774 ATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCAGTCAACGTCTTCAC 329715 Query 34966 AAAGATCTGCATG 34978 |||||||||||| Sbjct 329714 GAAGATCTGCATG 329702 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||||||||| ||||||||||| || || |||| | || Sbjct 330196 AGGACGAGATGCAAGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTCC 330137 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| || |||||||| | || | |||||||| || Sbjct 330136 TCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCT 330077 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| ||| | |||||| || | || || ||| Sbjct 330076 TGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTC 330017 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||||||||| || || || ||||| Sbjct 330016 TTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 329985 >seq1 Length=3243340 Score = 114 bits (126), Expect = 8e-21 Identities = 154/212 (73%), Gaps = 8/212 (4%) Strand=Plus/Minus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 |||| || | ||||||||| ||||||||||| || ||||| || |||| | || |||| Sbjct 2261292 CCAGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCA 2261233 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 |||||| || || || ||||| ||||||||||| |||| | || |||||||| | | Sbjct 2261232 ATTGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAA 2261173 Query 34890 TTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || ||||||| || | ||| || || | || || ||| Sbjct 2261172 TCTTCGCCTTCAC--AT--TATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATCGTC 2261117 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || ||||||||||| Sbjct 2261116 TTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 2261085 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| || ||||||||| ||||| ||||| || ||| | || |||| Sbjct 2261068 AGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCC 2261009 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || || || || || || || || | || | |||||||| || Sbjct 2261008 TCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCC 2260949 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGC----CTCGACATCAACGGTTAT 34941 | || || |||||| || |||||||| | | |||||| || | ||| || Sbjct 2260948 TGGATCTTCGCTTTGAC--AT--TATCGATTGTGTCGGACGACTCGACCTCCAAGGTGAT 2260893 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || || ||||| || |||||||||||||| Sbjct 2260892 GGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 2260857 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||||||||| || || || || | ||| |||| |||| |||||||| ||||| Sbjct 2260763 CTCTTTCTGAATGTTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCAGCGAA 2260704 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||||||||||| | || | ||| |||||||| | || || || ||| Sbjct 2260703 GATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTCACGTT 2260644 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | |||||| || | || || ||||| || || | ||||||||| Sbjct 2260643 GTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCTGTCAAGGTCTTTAC 2260584 Query 34966 AAAGATCTGCATG 34978 || ||||||||| Sbjct 2260583 GAAAATCTGCATG 2260571 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 8/211 (4%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || |||| ||| ||||||||| || || || || || || ||||| |||| || || Sbjct 2260497 AGATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTCAAGC 2260438 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 || || || |||||||| || || |||||||| | || | ||||||||||| | || Sbjct 2260437 TGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATC 2260378 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 || ||||| || | ||||| || | ||| || |||| || |||||||| Sbjct 2260377 TTCGCCTTGAC--AT--TGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTT 2260322 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| | ||||| || |||||||||||| Sbjct 2260321 GCCCGTCAATGTCTTGACGAAGATCTGCATG 2260291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692744428666