Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457915.1_202015- 11-03] 14 sequences; 26,374,274 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 seq1 122 8e-23 >seq6 Length=2246423 Score = 127 bits (140), Expect = 2e-24 Identities = 151/202 (75%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||| || | ||| | | | |||||||| |||||||| Sbjct 330409 GTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCA-TCCTCGAGTTGCTTGCC 330351 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| ||||||||||| || ||||| || |||||||| |||||| ||| Sbjct 330350 GGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTTGCCTT 330291 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||| | | ||| || |||| |||| || ||||||||||| || Sbjct 330290 CACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 330231 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || ||||| ||||||||| || Sbjct 330230 CTTGACGAAGATCTGCATGCCT 330209 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| |||||||| || || ||| ||| ||||||||||||||||| Sbjct 330686 GGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACC-GTCCTCGAGCTGCTTGC 330628 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 |||| ||||||| ||||||||||||||||| || ||||||||||| ||||| || Sbjct 330627 CCGCAAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCT 330568 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | |||||| | | ||| || |||| |||| || || || || || | Sbjct 330567 TGACATTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATTGTCTTACCCGTGAGGG 330508 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 330507 TCTTGACAAAGATCTGCAT 330489 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| ||||| ||||| || || || || | ||| ||| |||||| Sbjct 329908 AAATGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCTTCGAGC 329849 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||||||| | || | ||||||||||| || |||||||| |||||||| |||| Sbjct 329848 TGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATC 329789 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | |||||| | | |||||| |||| |||| || || || Sbjct 329788 TTGGCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCA 329729 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 |||| || || ||||| ||||||||| || Sbjct 329728 GTCAACGTCTTCACGAAGATCTGCATGCCT 329699 Score = 113 bits (124), Expect = 4e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||||||| |||| | |||||||||||||| ||||| |||||||| Sbjct 329571 GTCCTCGAGCTGCTTGCCCGCGAAAATCAAACGCTGCTGGTCGGGGGGGATTCCTTCCTT 329512 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||| ||||| | || | ||||| | | |||||| || | ||||| Sbjct 329511 GTCCTGAATCTTCGCCTTGACGTTATCGATGGTGTCCGAAGACTCCACCTCAAGGGTGAT 329452 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 || || || || || || || || || ||||||||| || Sbjct 329451 CGTCTTCCCAGTGAGGGTCTTCACAAAGATCTGCATGTCT 329412 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| ||||| || || || ||| | ||| |||||||||||| Sbjct 330188 ATGCAAGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTCCTCGAGCTG 330129 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||||||| | || | ||||||||||| || || ||||| ||||| || ||||| Sbjct 330128 CTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTT 330069 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | |||||| | | ||| || |||| || | || ||||| || Sbjct 330068 CGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTCTTGCCCGT 330009 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||||||| ||||| Sbjct 330008 GAGGGTCTTGACGAAAATTTGCAT 329985 >seq1 Length=3243340 Score = 122 bits (134), Expect = 8e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| ||||||||||| | |||| | ||||| ||||| Sbjct 2260495 ATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTCAAGCTG 2260436 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 || || ||| | || || |||||||||||||||||||| || |||||||| ||||| Sbjct 2260435 TTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTT 2260376 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | ||||| | | |||||| || | |||| ||| ||||| || Sbjct 2260375 CGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCCGT 2260316 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 || || || ||||| ||||||||| Sbjct 2260315 CAATGTCTTGACGAAGATCTGCATG 2260291 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | || | | | ||||||||||||||||| Sbjct 2261053 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCA-TCCTCGAGCTGCTTGCC 2260995 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||| || || || |||||||| ||||| || |||||| || Sbjct 2260994 CGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGGATCTTCGCTTT 2260935 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | ||| || || | ||||| ||| ||||| ||||| || Sbjct 2260934 GACATTATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGGGT 2260875 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| || || |||||||| Sbjct 2260874 TTTCACAAAGATCTGCAT 2260857 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || ||||||||| | || | ||||| | |||||| || Sbjct 2260768 GTAGACTCTTTCTGAATGTTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCA 2260709 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | ||| |||||||||||||| || ||||||||||| ||||| ||| Sbjct 2260708 GCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTC 2260649 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | ||| || |||| |||| || || || |||| || Sbjct 2260648 ACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCTGTCAAGGTC 2260589 Query 133644 TTTACGAAAATCTGCATG 133661 |||||||||||||||||| Sbjct 2260588 TTTACGAAAATCTGCATG 2260571 Score = 109 bits (120), Expect = 5e-19 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | |||| ||||||||| || |||||||| | | ||| ||| |||||| | Sbjct 2261288 ATGGAGGGTGCTCTCTTTCTGAATGTTGTAATC--CGAAAGTGTGCGACCGTCCTCCAAT 2261231 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||||||||| |||| || || |||||||| || ||||||||||||||||| ||| Sbjct 2261230 TGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATC 2261171 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | |||||| | | ||| || || | |||| || ||||| Sbjct 2261170 TTCGCCTTCACATTATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATCGTCTTGCCT 2261111 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| |||||||| Sbjct 2261110 GTGAGGGTCTTGACGAAGATCTGCAT 2261085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420715401360