Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457915.1_202015- 11-03] 14 sequences; 26,374,274 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 4e-14 seq1 84.2 2e-11 >seq5 Length=2077621 Score = 93.3 bits (102), Expect = 4e-14 Identities = 177/261 (68%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 148111 TAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGA 148170 ||||| || || ||| ||| | ||| | || || || |||||||| | || ||| ||| Sbjct 447058 TAGATTCCCTCAATGGAGTCTTCTTTCATGCAAACCAGGAAACACGAGCTCAATTGAGGA 446999 Query 148171 ATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATC 148230 | | || ||||| ||| || || || ||||| || || | || | ||| Sbjct 446998 TTGGGTGTACCCGCGTTGAAGAGTGTTGGTGAGGCGTGAGTGAAGTAACGTTCAGACATT 446939 Query 148231 ATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGC 148290 | | || || ||||||||| |||| || ||||||||||||| | || |||||| Sbjct 446938 AGGTTGTAGGTTTCAATAGCGCGATCGACATCAGCGCCGTGAATGCCGACAGCTACGCGC 446879 Query 148291 ATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTT 148350 |||| |||||||||||| ||||| || || | |||||| ||||| || | Sbjct 446878 ATGATCATGTGCTGTGGACGTTCTGCGACACGGCCATTGATCCGAAGAAGGTAAGAACGC 446819 Query 148351 TCGAGGGTTTTGTAACCAAAG 148371 || || || ||| |||||||| Sbjct 446818 TCCAGCGTCTTGAAACCAAAG 446798 >seq1 Length=3243340 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||| || ||| |||||||| || || | | Sbjct 2261050 GACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCA 2260991 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || ||||||||||| || || ||||| || ||||| || || ||| | Sbjct 2260990 AAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGGATCTTCGCTTTGACA 2260931 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| || ||| || || | || | || || |||||||| ||||| Sbjct 2260930 TTATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTTTTC 2260871 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 2260870 ACAAAGATCTGCAT 2260857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611116593040