Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457915.1_202015- 11-03] 14 sequences; 26,374,274 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 2e-13 seq3 84.2 3e-11 >seq9 Length=1679134 Score = 91.5 bits (100), Expect = 2e-13 Identities = 108/145 (74%), Gaps = 6/145 (4%) Strand=Plus/Plus Query 182696 TTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCAAC 182755 |||||||||||||||||| || || ||| || || || |||||| | |||||||| Sbjct 1415583 TTTACCGCGAAGTGGGAAGACTCCAAAGTTGTCGCGCCCGACGACACCCAACCCCGCAAC 1415642 Query 182756 CGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGAT---TG 182812 || |||| ||| || ||||| || || |||| |||||||||||| || |||| | Sbjct 1415643 AGCAAGGGCTTTGGCAGAATCTCCTTCAGTGAGAATGAGAGTACATTT---AGATGCATT 1415699 Query 182813 TGCCGTACCCGCCTTGTTCGCGTCA 182837 ||| || || |||||||||||| Sbjct 1415700 CCTCGTCCCAGCGTTGTTCGCGTCA 1415724 >seq3 Length=2894765 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 122692 ATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATA 122751 || |||||||| |||||| || || |||||||| || |||||||||||||| | || Sbjct 1867728 ATGAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGGCCACGCTTCTTCAACCAGAAGATT 1867787 Query 122752 GCGCAGAATGACCCGGAGAAGAAGATACCCTCCACA 122787 | | ||| || ||||||||||| || ||||||||| Sbjct 1867788 GAGGCGAAAGAACCGGAGAAGAAAATGCCCTCCACA 1867823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031890094400