Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 4e-15 >seq6 Length=2225400 Score = 96.9 bits (106), Expect = 4e-15 Identities = 181/263 (69%), Gaps = 5/263 (2%) Strand=Plus/Plus Query 145963 GGGTTCCTC-TTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTA 146021 ||||||||| ||||||| || || | || | ||| || |||||||||| | |||||| Sbjct 2200036 GGGTTCCTCCTTGATCTTCCGAATGACCTCTCGGAGTTGATCCACGCCCT--CTCCGGTA 2200093 Query 146022 A--TCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACG 146079 || | | | | ||||| ||| || || || ||||||||||| |||||||| || Sbjct 2200094 TAGTCCTTTTCGCAATCCACATACTTCGCACCAAAATGCCTCCACTGAAACCCGTACACA 2200153 Query 146080 GGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGAC 146139 || ||||| || || | ||||| || ||||| | | | || ||| ||| Sbjct 2200154 GGACCCAGATCTCCTTCCCGTCTGTGACCGAGCCCTCGCTTCTCTAAAAATTCCTTTGAC 2200213 Query 146140 CCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 || || ||||||| || || ||| || || ||||| | ||||||| || || || Sbjct 2200214 CCATTCCCGTCCCAAATTTTCACGGCCTTCTTTGAGAGAATAGTGGAGTCTGTAGAGCCT 2200273 Query 146200 CTGATGAACCAGAGCAGCTCTTC 146222 | | |||||||| |||||||| Sbjct 2200274 TTCACAAACCAGAGAAGCTCTTC 2200296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076696736560