Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq5 109 1e-18 >seq5 Length=2172826 Score = 109 bits (120), Expect = 1e-18 Identities = 188/273 (69%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885 ||||| |||||| ||||||||| || || || || || ||||| ||| || Sbjct 491436 CTTTGGTTTCAAGACGCTGGAGCGTTCTTACCTTCTTCGGATCAATGGCCGTGTCGCAGA 491495 Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAG 248945 ||| ||||||||| | ||||| || |||||||| |||||| | ||| | || | Sbjct 491496 ACGTCCACAGCACATGATCATGCGCGTAGCTGTCGGTATTCACGGCGCTGATGTCGATCG 491555 Query 248946 CGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCT 249005 || | || || |||| | |||| |||||| | | || || ||| |||| || || Sbjct 491556 CGCTATTGAAACCTACAACCTAATGTCTGAACGTTACTTCACTCACGCCTCACCAACACT 491615 Query 249006 CTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGA 249065 ||||||||| ||||| ||| ||| |||||||||| || || || |||| |||| Sbjct 491616 CTTCAACGCGGGTACACCCAATCCTCAATTGAGCTCGTGTTTCCTGGTTTGCATGAAAGA 491675 Query 249066 CGACTCTGTCGACGGCATTTATGACACGCTTAA 249098 ||||| | || || || ||||| || || || Sbjct 491676 AGACTCCATTGAGGGAATCTATGAAACTCTGAA 491708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766207393152