Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq6 116 3e-21 seq1 100 3e-16 seq8 89.7 5e-13 >seq6 Length=2225400 Score = 116 bits (128), Expect = 3e-21 Identities = 160/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 131016 CAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCG 131075 |||||||| | | ||| | ||||||||||| || ||||| || || | |||||| Sbjct 323925 CAAACGCACCG--AGATGAAGAGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCG 323868 Query 131076 CGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTC 131135 |||||| ||||||||||| ||| | || |||||||||||||| || |||||||| || Sbjct 323867 GCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAAACGCTGCTGGTCGGGGGGGATTCCCTC 323808 Query 131136 TTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGT 131195 ||||| || ||| ||||| | || | || || | ||||| | |||| ||| Sbjct 323807 CTTGTCCTGAATCTTCGCCTTGACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGT 323748 Query 131196 AACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 | || || || || || || || ||||| ||||||||| || Sbjct 323747 GATCGTCTTCCCAGTGAGGGTCTTCACGAAGATCTGCATGTCT 323705 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131029 AAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGC 131088 ||||| | |||||||||||| |||||||| || || | |||||| ||| || ||| Sbjct 324201 AAATGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCTTCGAGC 324142 Query 131089 TGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATT 131148 |||||||| ||| |||| || ||||||||||| || ||||| || || ||||| ||| Sbjct 324141 TGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATC 324082 Query 131149 TTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCG 131208 || ||||| | || | || || | ||||| | |||| || | || || || Sbjct 324081 TTGGCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCA 324022 Query 131209 GTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || || ||||| ||||||||| || Sbjct 324021 GTCAACGTCTTCACGAAGATCTGCATGCCT 323992 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | ||| | ||| |||||||| || ||||| || ||| Sbjct 324505 GCCTCCACGTAGACGAAGGACGAGATGCAAGGTGGACTCCTTCTGGATGTTATAGTCGGA 324446 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| |||||| ||||||||||| ||| |||| || |||||||||||||| || Sbjct 324445 GAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGG 324386 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || || ||| ||| | | || | || || | ||||||| Sbjct 324385 AATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGAC 324326 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || || || || || || |||||||| ||||| Sbjct 324325 CTCGAGCGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 324278 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || || ||||| || || |||||| |||||| ||||||||||| || | Sbjct 324973 CTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAA 324914 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 || | ||||||||||| ||||| || ||||| ||||| || ||| ||||| | Sbjct 324913 AATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTGACATT 324854 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || || | ||||||| |||| || | || ||||| || || || || || Sbjct 324853 GTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATTGTCTTACCCGTGAGGGTCTTGAC 324794 Query 131223 GAAAATCTGCAT 131234 || |||||||| Sbjct 324793 AAAGATCTGCAT 324782 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || || ||||| || | ||||| ||||| || |||||||| Sbjct 324702 GTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCG 324643 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTG-CTT 131156 ||| | || | ||||||||||| || ||||| || || ||||| ||| | | || ||| Sbjct 324642 GCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTC-CTGAATCTTTGCCTT 324584 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | || | || || | ||||||| |||| || | || || ||||| || || Sbjct 324583 CACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 324524 Query 131217 TTTTACGAAAATCTGCATGACT 131238 || ||||| ||||||||| || Sbjct 324523 CTTGACGAAGATCTGCATGCCT 324502 >seq1 Length=3168126 Score = 100 bits (110), Expect = 3e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 131031 ATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTG 131090 ||| | ||| |||||||| || || |||||||| | |||||| ||||| ||||| Sbjct 2212496 ATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTCAAGCTG 2212437 Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 || || ||| |||| | |||||||||||| |||||||| || || ||||| || || Sbjct 2212436 TTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTT 2212377 Query 131151 CTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 | ||||| | || | ||| || | ||||| | || | || | ||| || || || Sbjct 2212376 CGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCCGT 2212317 Query 131211 TAGAGTTTTTACGAAAATCTGCATG 131235 | || || ||||| ||||||||| Sbjct 2212316 CAATGTCTTGACGAAGATCTGCATG 2212292 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||| || || |||||||||||| | || ||| ||||| | |||||| || Sbjct 2212769 GTAGACTCTTTCTGGATGTTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCA 2212710 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || || |||||||| ||||| || ||||| ||||| || ||| ||| Sbjct 2212709 GCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTC 2212650 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||| || | ||||||| |||| || | || || || || | || Sbjct 2212649 ACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCTGTCAAGGTC 2212590 Query 131218 TTTACGAAAATCTGCATG 131235 |||||||||||||||||| Sbjct 2212589 TTTACGAAAATCTGCATG 2212572 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | ||| || || | || | ||||||||||| || |||||||| ||| Sbjct 2213084 CCGCCGCGAAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 2213025 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| || | || | ||||| || ||||| ||| Sbjct 2213024 AGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGG 2212965 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| ||| |||| | || | || |||| ||||||| Sbjct 2212964 ATGCCCTCCTTATCCTGGATCTTCGCTTTGACATTATCGATTGTGTCGGACGACTCGACC 2212905 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || ||||| || || |||||||| Sbjct 2212904 TCCAAGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 2212858 >seq8 Length=1768214 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || | || | ||| ||||| ||||| ||||| |||||||| Sbjct 404541 CCACCGCGCAGACGAAGGACAAGGTGGAGGGTAGACTCTTTTTGGATGTTATAATCGCTG 404600 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || |||||||| || || | || | ||||||||||| || ||| Sbjct 404601 AGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGGTCGGGTGGG 404660 Query 131128 AT 131129 || Sbjct 404661 AT 404662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012717397760