Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 5e-13 >seq6 Length=2225400 Score = 89.7 bits (98), Expect = 5e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 20522 TCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCC 20581 ||||| ||| ||| ||||| ||||||||||| || ||||| ||||| |||| ||| || Sbjct 2200109 TCCACATACTTCGCACCAAAATGCCTCCACTGAAACCCGTACACAGGACCCAGATCTCCT 2200168 Query 20582 TCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCAT 20641 |||| |||||| | || || ||| | | || ||| | || ||||| |||||| Sbjct 2200169 TCCCGTCTGTGACCGAGCCCTCGCTTCTCTAAAAATTCCTTTGACCCATTCCCGTCCCAA 2200228 Query 20642 ATCTTGACTCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGC 20701 || || || | | |||| || ||||||| ||| || |||| |||||| || Sbjct 2200229 ATTTTCACGGCCTTCTTTGAGAGAATAGTGGAGTCTGTAGAGCCTTTCACAAACCAGAGA 2200288 Query 20702 AGCTCTT 20708 ||||||| Sbjct 2200289 AGCTCTT 2200295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372722759760