Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 seq3 102 8e-17 seq1 98.7 1e-15 >seq6 Length=2225400 Score = 104 bits (114), Expect = 2e-17 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || || |||||||| | ||| || ||||||||||| || |||| Sbjct 324699 GACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCGGCG 324640 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || || ||||| ||||| || || ||||| || ||||| ||| | |||| || | Sbjct 324639 AAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTC-CTGAATCTTTGCCTTCAC 324581 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | |||||| ||||||| ||| | ||| || || ||||| || | Sbjct 324580 GTTG-TCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCT 324522 Query 138599 TTACAAAAATCTGCATGGCT 138618 | || || ||||||||| || Sbjct 324521 TGACGAAGATCTGCATGCCT 324502 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/206 (70%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||| ||||| | || || ||||||||| || || || | Sbjct 323902 GACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCG 323843 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || | |||||| ||||| || || || || || ||||| ||| | || | || | Sbjct 323842 AAAATCAAACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTCC-TGAATCTTCGCCTTGAC 323784 Query 138541 TGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||| | ||||||||||||| || | ||| || ||||| || || || Sbjct 323783 GTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCAGTGAGGGTCTT 323724 Query 138600 TACAAAAATCTGCATGGCTTATAATA 138625 || || ||||||||| | ||||||| Sbjct 323723 CACGAAGATCTGCATGTC-TATAATA 323699 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 138409 AAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGT 138468 ||||| | | | |||||||| |||||||| ||||| | || || ||| ||||| Sbjct 324201 AAATGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCTTCGAGC 324142 Query 138469 TGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATT 138528 || || || | |||| | ||||| ||||| || || || || || ||||| ||| Sbjct 324141 TGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATC 324082 Query 138529 TTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCA 138588 || || | | || | ||||| | ||||||||||||| ||| | ||| || ||| Sbjct 324081 TTGGCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCA 324022 Query 138589 GTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 |||| || || || || ||||||||| || Sbjct 324021 GTCAACGTCTTCACGAAGATCTGCATGCCT 323992 >seq3 Length=2984533 Score = 102 bits (112), Expect = 8e-17 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 52650 GCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTT 52709 || || || || | |||| | |||||||| || || ||||||| |||||||||||||| Sbjct 1855299 GCCCTTCCTGTAGGGCTGATTGGCATGAATGCCAAGCTCATGTGCCAGTACATCGAGTTT 1855358 Query 52710 GTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCG 52769 || || ||||||||| | | ||||| |||| ||| |||||| || || Sbjct 1855359 GTTGCAGATCGTCTGCTCATTGCCCTCGGTGGCGAAAAGCACTACAACGCGACAAACCCC 1855418 Query 52770 TTTGAGTTTATGAACAACATTTCGCTTG-AGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 || || |||||| ||| || || |||| |||| ||||||||||| || |||||||| || Sbjct 1855419 TTCGACTTTATGGACATGATCTC-CTTGCAGGGGAAGACCAACTTCTTTGAGAAGCGGGT 1855477 >seq1 Length=3168126 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || || || | | Sbjct 2213051 GACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCA 2212992 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || || |||||||| ||||| || || || || || || ||| || ||| | Sbjct 2212991 AAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGGATCTTCGCTTTGACA 2212932 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| |||||| ||||| | || | || || |||||||| ||||| Sbjct 2212931 TTATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTTTTC 2212872 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 2212871 ACAAAGATCTGCAT 2212858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262313154080