Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 199 5e-46 >seq2 Length=2792455 Score = 199 bits (220), Expect = 5e-46 Identities = 256/353 (73%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || || || || ||||| || |||||||| Sbjct 1468558 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCAGCAGTGGCCTTGACCTCGAAGATACCC 1468499 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | || ||||| || || || || || || || || ||||| ||| Sbjct 1468498 TCCTCGATGGTAAGAAGTGACACATCGAAAGTTCCTCCTCCGAGATCGAAGATGAGGACG 1468439 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| || ||||| |||||||||||||| || || || || || || || Sbjct 1468438 TTGCGCTCGCCGGTCACCTTCTTGTCGAGACCGTACGCAATGGCGGCAGCGGTGGGCTCG 1468379 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || |||||||| ||||| || | || ||| | || || || || || || || Sbjct 1468378 TTGATGATACGAAGGATGTTCATTCCGGAGATGGTTCCGGCGTCCTTGGTAGCCTGGCGC 1468319 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||||||||| || |||||||| ||||| |||| |||||| || | ||||| Sbjct 1468318 TGCGAGTCGTTAAAGTACGCGGGGACCGTCACGACGGCGTTCGTGACGGTCGTGCCGAGG 1468259 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || ||| | || ||||| || ||||||||||| || |||||||| Sbjct 1468258 TAGGACTCAGCGGTCTCCTTCATCTTCAAGAGAACCATCGAGGAGATCTCTTC 1468206 Score = 140 bits (154), Expect = 4e-28 Identities = 193/268 (72%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || ||||| || ||||| | |||| ||| Sbjct 801793 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTAGCCTTGACGGCGAAGACACCG 801852 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||||| | | ||| ||||| || || || ||||| || || || ||||| ||| Sbjct 801853 CCGCTGATGTTGAGGAGCGAGACATCGAAGGTTCCTCCACCGAGATCGAAGATGAGGACG 801912 Query 7577 TTCGTATCGTCGTCTTTGTT--CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || ||| ||||| | | || ||||||||||| ||||| || || || || || | Sbjct 801913 TTGCGCTCG--GTCTTCGATTGCTGGTCGAGACCGTATGCGATGGCGGCGGCGGTGGGCT 801970 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || || ||||| || || ||||||||||| | | || || || ||||| | | Sbjct 801971 CGTTGATGATACGGAGCACGTCGAGGCCAGCAATGGCGCCGGCGTCCTTGGTCGCGAGAC 802030 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 | ||||| ||||| |||||||| ||||| Sbjct 802031 GCTGCGAGTCGTTGAAGTAGGCAGGGAC 802058 Score = 93.3 bits (102), Expect = 5e-14 Identities = 112/152 (74%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| |||||||||| || |||||||| || || || ||||||||||| || Sbjct 1467939 GTGTTGATGGGGTTCATCGCCACCTGGTTCTTTGCGGCATCACCGATAAGACGCTC---G 1467883 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 || || | || | ||| || || || ||||| || || || || |||||||| || || Sbjct 1467882 TTGTCGGAGAAGGAGACATATGAGGGAGTCGTGCGGTTACCCTGATCGTTCGCGATGATC 1467823 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || |||||||| ||||| || || ||||| Sbjct 1467822 TCGACACGGTCGTTCTGCCACACACCCACGCA 1467791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132688851760