Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6 113 3e-20 seq1 105 4e-18 >seq6 Length=2225400 Score = 113 bits (124), Expect = 3e-20 Identities = 163/226 (72%), Gaps = 12/226 (5%) Strand=Plus/Minus Query 34764 AACCTCAAA---ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCT 34819 ||||||||| ||| || |||| || || ||||| |||||||||||||||||| | Sbjct 323930 AACCTCAAACGCACCGAGATGAAGAGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGT 323871 Query 34820 TCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCC 34879 || | || || ||||| || || || || || | || |||||||| | || | || Sbjct 323870 GCGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAAACGCTGCTGGTCGGGGGGGATTCC 323811 Query 34880 CTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACAT 34935 ||||||||| ||||||| ||||| | ||||||| | ||| | ||| || | Sbjct 323810 CTCCTTGTCCTGAATCTTCGCCTTGAC----GTTATCGATGGTGTCCGAAGACTCCACCT 323755 Query 34936 CGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| ||| || || || || ||||| |||||||| ||||||||||| Sbjct 323754 CGAGGGTGATCGTCTTCCCAGTGAGGGTCTTCACGAAGATCTGCAT 323709 Score = 111 bits (122), Expect = 1e-19 Identities = 156/214 (73%), Gaps = 9/214 (4%) Strand=Plus/Minus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| |||| ||||| || ||||| || || ||||| || ||| | || | || || Sbjct 324991 ACCAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCTC 324932 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || ||||| || || || |||||||| | || | ||| |||||||| Sbjct 324931 GAGCTGCTTGCCCGCAAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTG 324872 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGG 34947 ||||||| ||||| || | ||||| | ||| | ||| || |||| || || | Sbjct 324871 AATCTTCGCCTTGAC--AT--TGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATTG 324816 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || |||||||| ||||| |||||||||||||| Sbjct 324815 TCTTACCCGTGAGGGTCTTGACAAAGATCTGCAT 324782 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||||||||| |||||| | || | || || ||||| || || || || Sbjct 324186 TCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAG 324127 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 324126 ATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTA 324067 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| | ||| || |||| || || || ||||| || | |||||||| Sbjct 324066 TCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCAGTCAACGTCTTCACG 324007 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 324006 AAGATCTGCAT 323996 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||||||||| | ||| |||| || || || || ||||| || Sbjct 324696 TCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCGGCGAAA 324637 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| |||||| || ||| Sbjct 324636 ATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTTGCCTTCACGTTG 324577 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| | ||| || |||| || || || || || || || ||||| || Sbjct 324576 TCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACG 324517 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 324516 AAGATCTGCAT 324506 >seq1 Length=3168126 Score = 105 bits (116), Expect = 4e-18 Identities = 147/202 (73%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| |||||||||||||| || |||||||| | || | || |||| || || || Sbjct 2213282 GTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCAATTGCTTGCCC 2213223 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 ||||| || || ||||||||||| |||| | || |||||||| ||||||| || Sbjct 2213222 GCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATCTTCGCCTTC 2213163 Query 34905 ACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || || ||||||| | ||| | ||| || || | || || || || || ||||| Sbjct 2213162 AC--AT--TATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATCGTCTTGCCTGTGAG 2213107 Query 34961 AGTCTTCACAAAGATCTGCATA 34982 ||||| || |||||||||||| Sbjct 2213106 GGTCTTGACGAAGATCTGCATA 2213085 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| |||||| | || |||| || ||||| || || ||||| Sbjct 2213048 TCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCAAAA 2212989 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || || || | || | |||||||| || |||||| |||||| || Sbjct 2212988 ATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGGATCTTCGCTTTGAC--AT 2212931 Query 34911 GCTATCGATTCAC-CGGCC---TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 |||||||| ||| | || || || | ||| ||||| || || || || || || Sbjct 2212930 --TATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTTTT 2212873 Query 34967 CACAAAGATCTGCATA 34982 |||||||||||||||| Sbjct 2212872 CACAAAGATCTGCATA 2212857 Score = 84.2 bits (92), Expect = 1e-11 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || || || ||||| | || |||| || |||||||| || || || Sbjct 2212483 TCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTCAAGCTGTTTACCAGCGAAG 2212424 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||||| ||||| || Sbjct 2212423 ATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGAC--AT 2212366 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| | ||| || || | || ||||| || ||||| | ||||| Sbjct 2212365 --TGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCCGTCAATGTCTT 2212308 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 2212307 GACGAAGATCTGCAT 2212293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633544609392