Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 226 4e-54 seq6 168 9e-37 seq2 156 6e-33 >seq1 Length=3168126 Score = 226 bits (250), Expect = 4e-54 Identities = 188/230 (82%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||||||||||||||| ||||| || || |||||| | ||||| ||||||| Sbjct 2212856 GTATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCGT 2212915 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | |||||||||||||| ||||||| ||||| || |||||||| ||||| ||||| |||| Sbjct 2212916 CCGACACAATCGATAATGTCAAAGCGAAGATCCAGGATAAGGAGGGCATCCCACCGGATC 2212975 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | || || ||||||||||| || || ||||| || ||||| || ||||| | || |||| Sbjct 2212976 AACAGCGCCTTATTTTTGCGGGCAAGCAGCTCGAGGATGGCCGGACCCTTTCCGACTACA 2213035 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | || |||||||| ||||| |||||||| || | ||||| || ||| Sbjct 2213036 ACATCCAGAAGGAGTCGACTCTTCACCTTGTCCTCCGTCTTCGCGGCGGT 2213085 Score = 163 bits (180), Expect = 4e-35 Identities = 161/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || | || || || || ||||| || || || ||||| || Sbjct 2212293 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACTCTTGAAGTGGAGTCTTCG 2212352 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| || |||||||| || ||||| || || || ||||| ||| Sbjct 2212353 GACACTATCGACAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAG 2212412 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| || ||||||||||||||||| ||||| || || || |||||||||| Sbjct 2212413 CAGCGTCTTATCTTCGCTGGTAAACAGCTTGAGGATGGGCGCACGCTTTCTGATTACAAT 2212472 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTG 172069 | || ||||||||||| || || |||| Sbjct 2212473 ATCCAGAAGGAGTCTACCCTTCATCTTG 2212500 Score = 163 bits (180), Expect = 4e-35 Identities = 161/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||| | || || || || ||||| |||||||| ||||| || Sbjct 2212573 ATGCAGATTTTCGTAAAGACCTTGACAGGGAAGACGATCACTCTCGAGGTCGAGTCTTCG 2212632 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || || |||||||| || |||||||| ||||| ||||| ||| Sbjct 2212633 GACACTATTGACAACGTGAAGGCGAAGATTCAGGACAAGGAAGGGATTCCTCCCGACCAG 2212692 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| | || || ||||| || ||| | || ||||| || || ||| | ||||||||| Sbjct 2212693 CAACGGTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGGCGAACTCTCTCCGATTACAAC 2212752 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTG 172069 | || || ||||||||||| ||||||| Sbjct 2212753 ATCCAGAAAGAGTCTACTCTGCACCTTG 2212780 Score = 147 bits (162), Expect = 3e-30 Identities = 149/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || ||||| || || || || ||||| | ||||| ||||| | Sbjct 2213084 GTATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACGATCACGTTGGAGGTAGAGTCTT 2213143 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| |||||||| | || || ||||||||||| ||||||||||| || || || | Sbjct 2213144 CGGACACGATCGATAATGTGAAGGCGAAGATTCAAGACAAGGAAGGCATCCCGCCGGACC 2213203 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 ||||||| || |||||||| || || || | || || || || || || | ||||||| Sbjct 2213204 AGCAACGCCTGATTTTTGCGGGCAAGCAATTGGAGGACGGTCGCACACTTTCGGATTACA 2213263 Query 172040 ACGTTCAAAAGGAG 172053 || |||| || ||| Sbjct 2213264 ACATTCAGAAAGAG 2213277 Score = 140 bits (154), Expect = 4e-28 Identities = 335/500 (67%), Gaps = 9/500 (2%) Strand=Plus/Minus Query 198450 TTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTT 198509 |||||||| || | || || ||| || ||||| ||| || |||| |||| | || Sbjct 2031697 TTCAAGGACGTCGCAGGCATGGACGAGGCCAAGGAGGAGATCATGGAGTTTGTCAAATTC 2031638 Query 198510 CTTAAAAACCCCGAAAAGTACTATGGAAG-TGGTGCCCGA-ATCCCACGTGGTGCTCTTC 198567 || || ||||| || ||| | ||| ||| | | | ||||| || ||||| | | Sbjct 2031637 CTCAAGGACCCCACCAAATACGAA--AAGCTGGGGGCTAAGATCCCTCGCGGTGCCATCC 2031580 Query 198568 TCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGA 198627 || |||| | || ||||| || || || | || ||| || | ||| || ||| ||| Sbjct 2031579 TCTCCGGACCTCCTGGTACGGGAAAGACGTTACTTGCTAAGGCCACCGCCGGCGAAGCGA 2031520 Query 198628 GTGTCCCCTTTCT-TCAGTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGT 198686 | ||||| || || || || ||||| | ||| ||||||||||||| ||||||||| Sbjct 2031519 GCGTCCCTTTCCTCTCCGT-CTCCGGTTCCGAATTCGTCGAGATGTTCGTCGGTGTTGGT 2031461 Query 198687 GCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTC 198746 | ||| || || || || || | | || ||||| || || ||||||||| Sbjct 2031460 TCCTCGCGTGTACGCGACCTTTTCGCGTCCGCGAAGAAAAATGCCCCTTGCATCATCTTC 2031401 Query 198747 ATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGG---TGGAACTACTACACCTGGTAAT 198803 || ||||| |||||||| |||||||| || || ||| | | ||| || Sbjct 2031400 ATCGATGAAATTGACGCCATTGGTAAGTCACGCGGAAAGGGAGGCAACATGGGTGGGAAC 2031341 Query 198804 GATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGACAATGAG 198863 || ||||| ||| |||| | |||||||| || |||||||||||||||| || || Sbjct 2031340 GACGAGCGCGAGTCGACGCTCAACCAGCTCCTTGTCGAGATGGATGGTTTTGGCACACAG 2031281 Query 198864 ACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTT 198923 | |||| || | || | || |||||| |||| |||| || ||||| | Sbjct 2031280 CAGCATGTCGTCGTATTAGCCGGCACCAATAGGCCTGATGTCCTCGACCCCGCACTCATG 2031221 Query 198924 CGTCCCGGTCGATTCGACCG 198943 |||||||| || |||||||| Sbjct 2031220 CGTCCCGGCCGGTTCGACCG 2031201 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||||| || || || || |||||||| ||||| ||||| || Sbjct 608160 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCT 608101 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| || ||||||||||||| || || |||||||| Sbjct 608100 GACACCATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGG 608057 Score = 89.7 bits (98), Expect = 7e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || || || || || || ||||| || ||||||||||| || Sbjct 2212013 ATGCAGATCTTCGTTAAGACTCTCACCGGCAAGACCATCACACTTGAGGTTGAGTCTTCC 2212072 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || || ||||| || |||| ||||||||||| |||||||| || Sbjct 2212073 GATACCATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGG 2212116 >seq6 Length=2225400 Score = 168 bits (186), Expect = 9e-37 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| ||||| || || |||||||||||||| ||||| || Sbjct 323709 ATGCAGATCTTCGTGAAGACCCTCACTGGGAAGACGATCACCCTCGAGGTGGAGTCTTCG 323768 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||||||| |||| || |||||||| || ||||| || || || ||||| ||| Sbjct 323769 GACACCATCGATAACGTCAAGGCGAAGATTCAGGACAAGGAGGGAATCCCCCCCGACCAG 323828 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | ||||| || || || ||||| || || || || ||||| | || || ||| Sbjct 323829 CAGCGTTTGATTTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTATAAC 323888 Query 172042 GTTCAAAAGGAGTCTACTCTACACCT 172067 | || |||||||| ||||| || || Sbjct 323889 ATCCAGAAGGAGTCGACTCTTCATCT 323914 Score = 152 bits (168), Expect = 7e-32 Identities = 155/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| || || || ||||| || || || || || || |||||||| |||| Sbjct 324273 GTGGTATGCAAATTTTCGTCAAGACCCTCACGGGCAAGACGATTACGCTCGAGGTCGAGT 324332 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||||||| | || || ||||||||||||||||| |||||||| || | Sbjct 324333 CTTCTGACACGATCGATAACGTGAAGGCGAAGATTCAAGATAAGGAGGGCATTCCCCCGG 324392 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || | || || || || || ||||| || || || || || ||| | || | Sbjct 324393 ACCAGCAGCGCTTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCCGACT 324452 Query 172037 ACAACGTTCAAAAGGAGTCTAC 172058 | ||| | || |||||||| || Sbjct 324453 ATAACATCCAGAAGGAGTCCAC 324474 >seq2 Length=2792455 Score = 156 bits (172), Expect = 6e-33 Identities = 248/356 (70%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 |||||||| || || || ||||| | | |||||||||||||| || || || | | | Sbjct 1468203 CCCGAAGAGATCTCCTCGATGGTTCTCTTGAAGATGAAGGAGACCGCTGAGTCCTACCTC 1468262 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || | || || | | || || ||||| || || || ||||| | || || || || Sbjct 1468263 GGCACGACCGTCACGAACGCCGTCGTGACGGTCCCCGCGTACTTTAACGACTCGCAGCGC 1468322 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||||| || |||||||| | | || | || | ||| ||| | || ||||| || Sbjct 1468323 CAGGCTACCAAGGACGCCGGAACCATCTCCGGAATGAACATCCTTCGTATCATCAACGAG 1468382 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || ||||| || ||||| |||||||| | || || || || Sbjct 1468383 CCCACCGCTGCCGCCATTGCGTACGGTCTCGACAAGAAGGTGACCGGCGAGCGCAACGTC 1468442 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 | ||||| |||||||| || || || || ||||| |||||||| | || || | ||| Sbjct 1468443 CTCATCTTCGATCTCGGAGGAGGAACTTTCGATGTGTCACTTCTTACCATCGAGGAGGGT 1468502 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| || ||||| ||||||||||| || || | |||||||| || || || Sbjct 1468503 ATCTTCGAGGTCAAGGCCACTGCTGGTGACACCCACTTGGGTGGTGAGGACTTTGA 1468558 Score = 113 bits (124), Expect = 6e-20 Identities = 189/271 (70%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780 ||| ||||| ||||||| || || || || | ||||| |||||||| | || ||||| Sbjct 802059 TGTCCCTGCCTACTTCAACGACTCGCAGCGTCTCGCGACCAAGGACGCCGGCGCCATTGC 802000 Query 195781 GGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || || || | || ||||| || || || || || || || || || ||||| Sbjct 801999 TGGCCTCGACGTGCTCCGTATCATCAACGAGCCCACCGCCGCCGCCATCGCATACGGTCT 801940 Query 195841 GGACAAGAACAAGGACGAAGATAAA----AATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 ||| || ||| |||||| | || || | ||||| ||||||||||| || | Sbjct 801939 CGACCAG--CAAT--CGAAGACCGAGCGCAACGTCCTCATCTTCGATCTCGGTGGAGGAA 801884 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | || |||||||| || ||||| || || ||| | |||| || |||||||| || | Sbjct 801883 CCTTCGATGTCTCGCTCCTCAACATCAGCGGCGGTGTCTTCGCCGTCAAGGCTACCGCCG 801824 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| || || | |||||||| || || || Sbjct 801823 GTGACACCCACTTGGGTGGTGAGGACTTTGA 801793 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391 || || ||||| ||||| || || ||||| ||||| ||| |||| || || || ||||| Sbjct 1467791 TGCGTGGGTGTGTGGCAGAACGACCGTGTCGAGATCATCGCGAACGATCAGGGTAACCGC 1467850 Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451 || ||||| || || || |||| | || || || ||||| | || ||||||||||| Sbjct 1467851 ACGACTCCCTCATATGTCTCCTTCTCCGACAACGAGCGTCTTATCGGTGATGCCGCAAAG 1467910 Query 195452 AATCAGACAGCTATGAACCCTATCAATAC 195480 || ||| || |||||||| ||||| || Sbjct 1467911 AACCAGGTGGCGATGAACCCCATCAACAC 1467939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862284874080