Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 129 5e-25 >seq1 Length=3168126 Score = 129 bits (142), Expect = 5e-25 Identities = 191/269 (71%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 34305 GGACACGATGAGCTCAGTCTCCGGGTTGT--CACATTCCGGACACAACACAAACTTGCGG 34362 || || |||||| || ||||||||||| | ||| ||| |||| ||| |||||| | Sbjct 3144610 GGTCAGGATGAGGTCCGTCTCCGGGTTCTTGCACGCGCCG--CACAGCACGAACTTGTCG 3144667 Query 34363 ATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAAT 34422 ||||| |||| || || || | | ||| ||||| | ||| ||||||||| | Sbjct 3144668 ATGAACGCATCGAGGAGCTCGCGGAGGCGGGCGGCATCGTGCGCGCCATTGACGATGTAA 3144727 Query 34423 CGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTC 34482 || ||||| || | ||||| ||| ||||| || ||||| | |||||| | || ||| Sbjct 3144728 CGGTCGTTCTTCTCGTCGACGGTCGTCTGCGCACCGAGCTCAGAGCCGAAGAATTTGGTC 3144787 Query 34483 GGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTC 34542 ||||| ||| ||| || ||| || || | |||| ||||||| ||| || || Sbjct 3144788 GGGTAGGTGGGCGGGCGGGAAAGTGCGCGCGCTACGTCGGACATGTTGGGGATCACGGTT 3144847 Query 34543 TTGATGCCGTTGCCCTTTCCTTCGACCTT 34571 |||||||||||||| || ||||||| ||| Sbjct 3144848 TTGATGCCGTTGCCTTTGCCTTCGATCTT 3144876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841529558902