Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 >seq1 Length=3168126 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 137208 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTG 137267 ||||| ||||| || || || || |||||||| | |||| | || || || || Sbjct 2212496 ATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTCAAGCTG 2212437 Query 137268 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 137327 ||||||||| |||| ||||| ||||| |||||||| || || || ||||| ||| || Sbjct 2212436 TTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTT 2212377 Query 137328 TTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 137387 || | | || | ||||| | | || ||||||| ||| | |||||||| || Sbjct 2212376 CGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCCGT 2212317 Query 137388 CAATGTTTTTACGAATATTTGCAT 137411 |||||| || ||||| || ||||| Sbjct 2212316 CAATGTCTTGACGAAGATCTGCAT 2212293 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 ||||| ||||| || |||||||||||| | || | | || || | || || ||| Sbjct 2212769 GTAGACTCTTTCTGGATGTTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCA 2212710 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||||| |||||||| |||||||| || ||||| ||||| ||| || || Sbjct 2212709 GCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTC 2212650 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | || || || | ||| | |||||| || ||||| || Sbjct 2212649 ACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCTGTCAAGGTC 2212590 Query 137395 TTTACGAATATTTGCAT 137411 |||||||| || ||||| Sbjct 2212589 TTTACGAAAATCTGCAT 2212573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543914504800