Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6 118 1e-21 seq1 116 4e-21 >seq6 Length=2225400 Score = 118 bits (130), Expect = 1e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 |||| || || || || ||||| || ||||| ||||| || |||| | ||| |||| Sbjct 323916 CGAGATGAAGAGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGA 323857 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 |||| ||||| || ||||||||||||||||| ||||| || || || || || || |||| Sbjct 323856 GCTGCTTGCCCGCGAAAATCAAACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTCCTGAA 323797 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 | || ||||| || | ||||| || || ||||| ||||| || || || || | Sbjct 323796 TCTTCGCCTTGACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCC 323737 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | || || ||||| || ||||| Sbjct 323736 CAGTGAGGGTCTTCACGAAGATCTGCAT 323709 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | ||||| || | ||||| ||||| || ||||| |||||| Sbjct 324504 CCTCCACGTAGACGAAGGACGAGATGCAAGGTGGACTCCTTCTGGATGTTATAGTCGGAG 324445 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| ||||| || || ||||| |||||||| || || || Sbjct 324444 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGA 324385 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || |||||||| || || || || | ||||| || || || || Sbjct 324384 ATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACC 324325 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || || || || | || || |||||||||||||| Sbjct 324324 TCGAGCGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 324278 >seq1 Length=3168126 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || |||||||||||| || ||| | || ||| Sbjct 2213066 ACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCCTCG 2213007 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| |||||||| | ||||| ||||| || || ||||| || || || || Sbjct 2213006 AGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGG 2212947 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || |||||| || | |||||||||||| || || || | || ||||| || Sbjct 2212946 ATCTTCGCTTTGACATTATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTG 2212887 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||||| || || || ||||| Sbjct 2212886 CCAGTCAGGGTTTTCACAAAGATCTGCAT 2212858 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 134523 TCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 || || ||||||||||| || || ||| || ||| || | || ||||| |||||| Sbjct 2213276 TCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCAATTGCTTGCCCGCAAAA 2213217 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 |||| || ||||| || ||||| |||||||| || |||||||| || || || Sbjct 2213216 ATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATCTTCGCCTTCACATTA 2213157 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | ||||| || || || || || | || || || || || || | || || ||| Sbjct 2213156 TCGATCGTGTCCGAAGACTCTACCTCCAACGTGATCGTCTTGCCTGTGAGGGTCTTGACG 2213097 Query 134703 AAAATTTGCAT 134713 || || ||||| Sbjct 2213096 AAGATCTGCAT 2213086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398311555280