Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq6 82.4 6e-11 >seq6 Length=2225400 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/227 (69%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 118783 TGATCCACACCCTTTCCAGTATACTGAGACTCGCATCCTTTATATTCTGCCCCAAAAAAT 118842 |||||||| |||| ||| ||||| | ||||| | ||| | || |||||| Sbjct 2200073 TGATCCACGCCCTCTCCGGTATAGTCCTTTTCGCAATCCACATACTTCGCACCAAAATGC 2200132 Query 118843 CTCCATTGAAAACCATAAACAGGCCCCAGATCTCCCTGGGACCTAAAATCTAAACCTACT 118902 ||||| ||||| || || ||||| ||||||||||| | || | | | ||| | Sbjct 2200133 CTCCACTGAAACCCGTACACAGGACCCAGATCTCCTTCCCGTCTGTGACCGAGCCCT-CG 2200191 Query 118903 TTTCTCTGAAA-TTCTTTTGACCCATTAGCATTCCAAATAGCAACTCCtttttttGCCAG 118961 |||||| ||| ||| ||||||||||| | | |||||| || | || |||| || Sbjct 2200192 CTTCTCTAAAAATTCCTTTGACCCATTCCCGTCCCAAATTTTCACGGCCTTCTTTGAGAG 2200251 Query 118962 ATCATTAGAGTTTGTAGAACCACTTAAAAACCAAAGAAGCTCCTCAA 119008 | | | |||| |||||| || | | |||||| |||||||| |||| Sbjct 2200252 AATAGTGGAGTCTGTAGAGCCTTTCACAAACCAGAGAAGCTCTTCAA 2200298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414476729279896