Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq6 136 3e-27 seq1 132 3e-26 >seq6 Length=2225400 Score = 136 bits (150), Expect = 3e-27 Identities = 160/213 (75%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| ||||||| ||||||||||| ||||| ||||| || | || ||| |||| | Sbjct 324992 CACCAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCGTCCT 324933 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| || ||||| || | |||||||| || | ||| | |||||||| ||| Sbjct 324932 CGAGCTGCTTGCCCGCAAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCT 324873 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 |||||| ||| || ||| | || ||||| | || || ||||| | ||| || || Sbjct 324872 GAATCTTCGCCTTGACATTGT--CGATCGTGTCCGAAGACTCGACCTCGAGCGTGATTGT 324815 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||||||||||||| || ||||| ||||| Sbjct 324814 CTTACCCGTGAGGGTCTTGACAAAGATCTGCAT 324782 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| |||||||| || |||| ||| ||| |||| || |||||||| || || || Sbjct 324469 CTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 324410 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||| |||||||| || | || | || ||||| || |||||| ||||| | Sbjct 324409 GATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTT 324350 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||| | || || ||||| | |||||||||||| |||||||||||||| || Sbjct 324349 ATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTCTTGCCCGTGAGGGTCTTGAC 324290 Query 44326 GAAGATTTGCAT 44337 ||| |||||||| Sbjct 324289 GAAAATTTGCAT 324278 Score = 131 bits (144), Expect = 1e-25 Identities = 157/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 44128 CACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 |||| || ||||| || |||||| |||||||| || || | || ||| |||| | Sbjct 323919 CACCGAGATGAAGAGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCT 323860 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| || || || |||||||||||||| || | || | || ||||| ||| Sbjct 323859 CGAGCTGCTTGCCCGCGAAAATCAAACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTCCT 323800 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| | | | |||||||| | || |||||||| | || ||||||| Sbjct 323799 GAATCTTCGCCTTGACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCT 323740 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || |||||||||||||||||||| |||||| Sbjct 323739 TCCCAGTGAGGGTCTTCACGAAGATCTGCATG 323708 Score = 109 bits (120), Expect = 4e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || ||||| || || | || ||| |||| || |||||||| || || || Sbjct 324187 CTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAA 324128 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||| |||||||| || | || | || ||||| ||| ||||| ||| | | Sbjct 324127 GATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 324068 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||| | || |||||||| | ||| ||||||||||| || | |||||||| Sbjct 324067 ATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCAGTCAACGTCTTCAC 324008 Query 44326 GAAGATTTGCATG 44338 |||||| |||||| Sbjct 324007 GAAGATCTGCATG 323995 >seq1 Length=3168126 Score = 132 bits (146), Expect = 3e-26 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 44130 CCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCA 44189 |||| || || |||||||| || || ||||||||||| | ||| ||| |||| |||| Sbjct 2213293 CCAGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCA 2213234 Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249 ||||| || ||||| |||| || ||||| || | || | |||||||| || | Sbjct 2213233 ATTGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAA 2213174 Query 44250 TCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 ||||| ||||| | | || ||||| | || || ||||||| ||| |||||||| | Sbjct 2213173 TCTTCGCCTTCACATTATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATCGTCTTGC 2213114 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||||||| |||||||| ||||| Sbjct 2213113 CTGTGAGGGTCTTGACGAAGATCTGCAT 2213086 Score = 122 bits (134), Expect = 6e-23 Identities = 155/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| |||| || || ||| || |||||||||||||||| ||| ||| | || | Sbjct 2212783 CACCAAGGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCGGAGAGAGTTCGCCCATCCT 2212724 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || || |||||||| || ||||| || | ||| | |||||||| ||| Sbjct 2212723 CCAACTGCTTTCCAGCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCT 2212664 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||||| | | || ||||| | || || ||||| | || ||||||| Sbjct 2212663 GAATCTTCGCCTTCACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCT 2212604 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || || | |||||| ||||| || |||||| Sbjct 2212603 TCCCTGTCAAGGTCTTTACGAAAATCTGCATG 2212572 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| ||||||||||| |||| || || | || || Sbjct 2213066 ACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCCTCG 2213007 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || ||||| || | ||||| ||||| | || | || ||||| ||| Sbjct 2213006 AGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGG 2212947 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| |||| | || | || ||||||| || || ||||||| || || ||||| Sbjct 2212946 ATCTTC-GCTTTGACATTATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTT 2212888 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| ||||| ||||| ||||| Sbjct 2212887 GCCAGTCAGGGTTTTCACAAAGATCTGCAT 2212858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990338576638