Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 2e-13 >seq6 Length=2299419 Score = 91.5 bits (100), Expect = 2e-13 Identities = 180/263 (68%), Gaps = 5/263 (2%) Strand=Plus/Plus Query 145963 GGGTTCCTC-TTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTA 146021 ||||||||| ||||||| || || | || | ||| || || ||||||| | |||||| Sbjct 2274789 GGGTTCCTCCTTGATCTTCCGAATGACCTCTCGGAGTTGATCTACGCCCT--CTCCGGTA 2274846 Query 146022 A--TCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACG 146079 || | | | | ||||| ||| || || || ||||||||||| |||||||| || Sbjct 2274847 TAGTCCTTTTCGCAATCCACATACTTCGCACCAAAATGCCTCCACTGAAACCCGTACACA 2274906 Query 146080 GGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGAC 146139 || ||||| || || | ||||| || ||||| | | | || ||| ||| Sbjct 2274907 GGACCCAGATCTCCTTCCCGTCTGTGACCGAGCCCTCGCTTCTCTAAAAATTCCTTTGAC 2274966 Query 146140 CCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 || || ||||||| || || ||| || || ||||| | ||||||| || || || Sbjct 2274967 CCATTCCCGTCCCAAATTTTCACGGCCTTCTTCGAGAGAATAGTGGAGTCTGTAGAGCCT 2275026 Query 146200 CTGATGAACCAGAGCAGCTCTTC 146222 | | |||||||| |||||||| Sbjct 2275027 TTCACAAACCAGAGAAGCTCTTC 2275049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076696736560