Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 5e-12 >seq6 Length=2299419 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 42913 GTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCG 42972 ||||||||||| || | |||||| || |||| || || | || || | || ||||| Sbjct 332184 GTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCATCCTCGAGCTGCTTGCCC 332125 Query 42973 GCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTTT 43031 |||||||| | ||||| || |||| || | ||||| || || ||| ||| | | || Sbjct 332124 GCAAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTC-CTGAATCTTCGCCTT 332066 Query 43032 GACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGT 43091 ||| || | | ||||| || |||||| || | ||| || || || || || || || Sbjct 332065 GACATTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATTGTCTTACCCGTGAGGGT 332006 Query 43092 TTTCACAAAAATTTGCATT 43110 || ||||| || |||||| Sbjct 332005 CTTGACAAAGATCTGCATT 331987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369534928812