Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 5e-11 >seq1 Length=3205512 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/216 (69%), Gaps = 9/216 (4%) Strand=Plus/Minus Query 33160 CACCAAA-TGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG---- 33214 |||||| |||| || |||||||| || || |||||||| || | ||||| | Sbjct 2257898 CACCAAGGTGCAGAGTAGACTCTTTCTGAATGTTGTAATCGGAGA----GAGTTCGCCCA 2257843 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||| ||||||||| || || || ||||||||||| | || || ||||| || Sbjct 2257842 TCCTCCAACTGCTTTCCAGCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTG 2257783 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || |||| | || || | | ||| ||||| | | || || ||||| ||| Sbjct 2257782 TCCTGAATCTTCGCCTTCACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATC 2257723 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || || || || | || ||||||||||| |||||| Sbjct 2257722 GTCTTCCCTGTCAAGGTCTTTACGAAAATCTGCATG 2257687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777545608572