Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 5e-11 >seq1 Length=3205512 Score = 82.4 bits (90), Expect = 5e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 |||||| ||||| || |||||| | ||| |||| ||||| || ||||| || || Sbjct 2257879 CTCTTTCTGAATGTTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCAGCGAA 2257820 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049 ||||||||||||||||| |||| | ||||| || || ||| || || || | Sbjct 2257819 GATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTCACGTT 2257760 Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109 ||| ||| || | | ||| || |||| || || || || || || || ||||| || Sbjct 2257759 GTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCTGTCAAGGTCTTTAC 2257700 Query 44110 AAATATTTGCATG 44122 || || |||||| Sbjct 2257699 GAAAATCTGCATG 2257687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354777539466072