Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq8 93.3 2e-14 >seq8 Length=1834011 Score = 93.3 bits (102), Expect = 2e-14 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 377088 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 377029 Query 11528 CCGTCGACGATTGTGATTTT 11547 ||| || ||||| || || Sbjct 377028 CCGATGATAATTGTAATATT 377009 Score = 91.5 bits (100), Expect = 8e-14 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||| ||| ||||| | | |||||||||| ||||||||||||||||||||||||| Sbjct 401728 AAAAGGAAAGTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGC 401669 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| ||||||||||||| | |||| Sbjct 401668 TCTAACCAACTGAGCTAGTCGGCC 401645 Score = 91.5 bits (100), Expect = 8e-14 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 11428 GAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487 |||| | || || | | |||| ||| ||||| | | |||||||||| ||||||| Sbjct 402238 GAAAAAAAGGATCGAGACAAAAGGAAAGTGGCCAACGTGGGGATCGAACCCAAGACCTTC 402179 Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||| ||||||||||||| | |||| Sbjct 402178 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGGCC 402137 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11469 GATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||| Sbjct 376893 GATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGGC 376834 Query 11529 CG 11530 || Sbjct 376833 CG 376832 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 406128 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 406069 Query 11528 CC 11529 || Sbjct 406068 CC 406067 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 406316 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 406257 Query 11528 CC 11529 || Sbjct 406256 CC 406255 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261491155383064