Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 118 3e-21 >seq5 Length=2096082 Score = 118 bits (130), Expect = 3e-21 Identities = 387/610 (63%), Gaps = 56/610 (9%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 |||||| ||||| || ||||| ||| |||||||| | | | ||||| || ||| Sbjct 473415 AAGACGCTGGAGCGTTCTTACCTTCTTCGGATCAATGGCCGTGTCGCAGAACGTCCACAG 473474 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 || ||| | ||||| || ||| | || || || || | ||||| ||| ||| |||||| Sbjct 473475 CACATGATCATGCGCGTAGCTGTCGGCATTCACGGCGCTGATGTCGATCGCGCTATTGAA 473534 Query 363520 ACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATGCT 363579 || || || || | || ||| ||||| |||||| | |||||| | | ||| || Sbjct 473535 ACCTACAACCTAATGTCTGAACGTTACTTCACTCACGCCTCACCAACACTCTTCAACGCG 473594 Query 363580 GGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATC 363639 || || | ||||| || || || || || || | ||||| || || ||||| Sbjct 473595 GGTACACCCAATCCTCAATTGAGCTCGTGTTTCCTGGTTTGCATGAAAGAAGACTCCATT 473654 Query 363640 GAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATT 363699 ||||| |||| ||| || || ||||| |||||| | || ||||| || || || ||| Sbjct 473655 GAGGGAATCTATGAAACTCTGAAGAACTGTGCTATGATCAGCAAGACGGCCGGTGGCATT 473714 Query 363700 GGTGTATCGATCCACAATGTTCGTGC-ACAG----------------------------- 363729 || | || ||||| |||| || |||| Sbjct 473715 GGACTCAATATTCACAACATTCGGGCTACAGGGTACGTCTTGCAATTGATTCCGACTTCA 473774 Query 363730 ------------AACAGTTACATTCGCGGC-ACAGGG-----------GGATACTCGAAT 363765 ||||||| | | ||| | ||| | |||||||| || Sbjct 473775 TTTCTTCATTCTAACAGTTCCTATAGCGCCTACATCGCTGGTACCAATGGATACTCCAAC 473834 Query 363766 GGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGA 363825 || | ||||||||||| || | || ||| ||||| | || || ||||| || || Sbjct 473835 GGTATTGTTCCCATGCTCCGCGCGTACGACGCGACTGCTCGCTATGTAGACCAAGGCGGT 473894 Query 363826 GGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAG 363885 |||||| || || ||||| || || || ||||| || |||||||| | || Sbjct 473895 AACAAGCGCCCGGGTGCTTTTGCAATCTACCTTGAGCCATGGCACGCCGATATCTACGAA 473954 Query 363886 TTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTA 363944 || | || ||||| ||||| ||| || || |||||| | |||||||| || || ||||| Sbjct 473955 TTCATCGACCTCCGCAAAAATCAC-GGCAAGGAGGAAGTCCGTGCACGCGACCTCTTCTA 474013 Query 363945 TGCACTTTGG 363954 |||||| ||| Sbjct 474014 TGCACTCTGG 474023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353366210948