Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 105 7e-18 seq8 100 3e-16 seq6 95.1 1e-14 >seq1 Length=3205512 Score = 105 bits (116), Expect = 7e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||||| || || || || || || |||||||| | | |||||| | || |||||| Sbjct 2257613 AGATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTCAAGC 2257554 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 || || || || | || || ||||||||||||||||| || || || || || || || Sbjct 2257553 TGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATC 2257494 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||| ||| || | || || | |||||||| | ||| | ||||||||| Sbjct 2257493 TTCGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCC 2257434 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || || ||||| || ||||| Sbjct 2257433 GTCAATGTCTTGACGAAGATCTGCAT 2257408 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| |||||||||||||| | || || ||| | || || | |||||| || Sbjct 2257884 GTAGACTCTTTCTGAATGTTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCA 2257825 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | ||| ||||||||||||||||| ||||| || || || || || ||| Sbjct 2257824 GCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTC 2257765 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || || || | ||| | ||||| || ||||| || Sbjct 2257764 ACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCTGTCAAGGTC 2257705 Query 64427 TTTACGAAAATTTGCAT 64443 ||||||||||| ||||| Sbjct 2257704 TTTACGAAAATCTGCAT 2257688 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||||||||| | | || || || |||| ||||| || || || |||||||| || | Sbjct 2258200 ACCGCCGCGAAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 2258141 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | || || ||||||||||| ||| |||| || ||||| || || || || Sbjct 2258140 AAGGGTCCGGCCATCCTCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGG 2258081 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 || || || || || || | | || ||||| ||| || | ||| || | || | Sbjct 2258080 GATGCCCTCCTTATCCTGGA-TCTTCGCTTTGACATTATCGATTGTGTCGGACGACTCGA 2258022 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | ||||||||| |||| ||||| || || || ||||| Sbjct 2258021 CCTCCAAGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 2257973 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 ||||| |||||||||||||| | | ||||| |||| || | |||||||| ||| || Sbjct 2258391 TCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCAATTGCTTGCCCGCAAAA 2258332 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || || |||||||| || || || ||||| || ||||| || || ||| ||| Sbjct 2258331 ATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATCTTCGCCTTCACATTA 2258272 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || | || || || | || | |||||||| || | || || ||| Sbjct 2258271 TCGATCGTGTCCGAAGACTCTACCTCCAACGTGATCGTCTTGCCTGTGAGGGTCTTGACG 2258212 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 2258211 AAGATCTGCAT 2258201 >seq8 Length=1834011 Score = 100 bits (110), Expect = 3e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||| || || || | || || |||||||| ||||| ||||| Sbjct 422592 ACCACCGCGCAGACGAAGGACAAGGTGGAGGGTAGACTCTTTTTGGATGTTATAATCGCT 422651 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| ||||||| |||||||| |||||| |||| || |||||||||||||| || Sbjct 422652 GAGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGGTCGGGTGG 422711 Query 64336 AAT 64338 || Sbjct 422712 GAT 422714 >seq6 Length=2299419 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||||| ||||| || || || ||||| || || | | |||||| |||| || ||| Sbjct 331120 AGATGAAGAGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGC 331061 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 |||||||| || |||| | |||||||||||||| || |||||||| || || || || Sbjct 331060 TGCTTGCCCGCGAAAATCAAACGCTGCTGGTCGGGGGGGATTCCTTCCTTGTCCTGAATC 331001 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||| || || | || || | ||||| || | || | ||||| || Sbjct 331000 TTCGCCTTGACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCA 330941 Query 64418 GTCAAAGTTTTTACGAAAATTTGCATTTTAATAAT 64452 || | || |||||||| || ||||| | ||||| Sbjct 330940 GTGAGGGTCTTTACGAAGATCTGCATGTCTATAAT 330906 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||||| ||||| || || || || ||||| || | | ||||| | || || || Sbjct 331917 AGATGAAGAGTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGT 331858 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||||||||| ||||||| ||||||||||| || || || || || || || || || Sbjct 331857 TGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATC 331798 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 ||| ||| || || | || ||| | || || || | || | ||||||||| Sbjct 331797 TTTGCCTTCACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCG 331738 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || || ||||| || ||||| Sbjct 331737 GTCAGGGTCTTGACGAAGATCTGCAT 331712 Score = 89.7 bits (98), Expect = 5e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || || ||||| || | | |||||| | || || ||||||||||| ||| || Sbjct 332178 TCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCATCCTCGAGCTGCTTGCCCGCAAAA 332119 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 ||||| |||||||||||||||||||| ||||| || || || || || Sbjct 332118 ATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTT 332072 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | || || || || || ||||| || || | || ||||| |||| Sbjct 331696 AAGGACGAGATGCAAGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTC 331637 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| || | || | ||||||||||| || ||||| || || || || Sbjct 331636 CTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATC 331577 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || ||| || || | || ||| | || || || | || | || Sbjct 331576 TTGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGT 331517 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || |||||||||||||| Sbjct 331516 CTTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 331484 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || |||||||| || || | | |||||| ||||||| ||||||||||| Sbjct 331398 GTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCC 331339 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | ||||||||||| || || || || || || || || || || ||| Sbjct 331338 GCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 331279 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || ||| | ||||| || | || | ||||| || ||||| || Sbjct 331278 ACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCAGTCAACGTC 331219 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 331218 TTCACGAAGATCTGCAT 331202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644712562160