Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 131 2e-25 seq6 98.7 9e-16 seq5 87.8 2e-12 >seq1 Length=3205512 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||||||||| ||||| ||||||||| | || || ||| || | ||| |||||| Sbjct 2257884 GTAGACTCTTTCTGAATGTTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCA 2257825 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| || ||||| |||||||| || || ||||||||| || ||| ||| Sbjct 2257824 GCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTC 2257765 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| | | ||||||| | |||||| |||| || | ||| || || |||| || Sbjct 2257764 ACGTTGT-CAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCTGTCAAGGT 2257706 Query 127096 TTTTACAAAAATCTGCATG 127114 ||||| |||||||||||| Sbjct 2257705 CTTTACGAAAATCTGCATG 2257687 Score = 129 bits (142), Expect = 6e-25 Identities = 156/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 126905 ACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| ||| | |||||||| || || ||||||||||| | |||||| ||| || Sbjct 2257617 ACCAAGATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTC 2257558 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 |||||||| |||||| |||| | |||||||| |||||||| || |||||||||||| Sbjct 2257557 AAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTG 2257498 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || ||| ||||| | |||| ||||||| | ||| ||||| | || | || || Sbjct 2257497 AATCTTCGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTT 2257438 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||| |||| || || || || ||||||||| Sbjct 2257437 GCCCGTCAATGTCTTGACGAAGATCTGCATG 2257407 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | || || ||| || ||||| || || Sbjct 2258169 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCCTCGAGCTGCTTGCCC 2258110 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | || | ||||| ||||| || || ||||||||||| ||| ||| ||| ||| Sbjct 2258109 GCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGGATCTTCGCTTTG 2258050 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | |||||| || | ||| | || ||||| ||||| ||| Sbjct 2258049 ACATTATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTT 2257990 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 2257989 TTCACAAAGATCTGCAT 2257973 >seq6 Length=2299419 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 126906 CCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTA 126965 ||||||| | || ||||| || ||||| || || || | ||||| || || | Sbjct 331409 CCAAATGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCTTCGA 331350 Query 126966 GCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGA 127025 |||| || || ||| ||||||| |||||||| || || || ||||||||||||||| || Sbjct 331349 GCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGA 331290 Query 127026 TTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGC 127085 | || ||||| | |||| ||||| | ||| || |||| || | ||| || | Sbjct 331289 TCTTGGCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTC 331230 Query 127086 CGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 | |||| || || || || ||||||||| || Sbjct 331229 CAGTCAACGTCTTCACGAAGATCTGCATGCCT 331198 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||| || | ||||| ||| || || || || || Sbjct 331908 GTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCG 331849 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 ||| | || | |||||||| || || || || |||||||||||| ||| | | ||| || Sbjct 331848 GCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCC-TGAATCTTTGCCTT 331790 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | ||||| ||| ||||| | |||||| |||| || | ||| ||||||||||| | Sbjct 331789 CACGTTGT-CGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGG 331731 Query 127095 TTTTTACAAAAATCTGCATGGCT 127117 | || || || ||||||||| || Sbjct 331730 TCTTGACGAAGATCTGCATGCCT 331708 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || || || ||| | ||||| || || ||||| || || Sbjct 331680 GTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCC 331621 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| |||||||| || || || ||||||||||| || || ||| ||| Sbjct 331620 GCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTTCGCCTTC 331561 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | | |||||| |||| || | ||| ||||| || || || Sbjct 331560 ACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTCTTGCCCGTGAGGGTC 331501 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||| ||||| Sbjct 331500 TTGACGAAAATTTGCAT 331484 >seq5 Length=2096082 Score = 87.8 bits (96), Expect = 2e-12 Identities = 157/224 (70%), Gaps = 8/224 (4%) Strand=Plus/Minus Query 147274 TAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGA 147333 ||||| || || ||| |||||| || ||||| |||||||||||| | || ||| ||| Sbjct 473665 TAGATTCCCTCAATGGAGTCTTCTTTCATGCAAACCAGGAAACACGAGCTCAATTGAGGA 473606 Query 147334 CGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACGTGCC---CAGACTC 147390 || ||||| || || || || |||||| ||||| || | ||||| Sbjct 473605 TTGGGTGTACCCGCGTTGAAGAGTGTTGGTGAGGCGTGAGTGAA-GTAACGTTCAGAC-- 473549 Query 147391 ATCAATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACG 147450 || | | || |||||||| |||| || ||| ||||||||||| | | || ||| Sbjct 473548 ATTAGGTTGTAGGTTTCAATAGCGCGATCGACATCAGCGCCGTGAATGCCGACAGCTACG 473489 Query 147451 CGCATGAGCATGTGCTGGGGTCGTTCCGCAATCAC-GTCATTGA 147493 ||||||| ||||||||| || ||||| || | ||| | |||||| Sbjct 473488 CGCATGATCATGTGCTGTGGACGTTCTGCGA-CACGGCCATTGA 473446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500716787360