Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq6 127 5e-24 seq1 123 6e-23 seq8 84.2 5e-11 >seq6 Length=2299419 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || || |||||||||||||| |||| |||||||| | | ||| | |||||| || || Sbjct 331917 AGATGAAGAGTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGT 331858 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| |||||||| ||||| ||||||||||| || || || || ||||||||| Sbjct 331857 TGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATC 331798 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 ||| ||||||| |||| ||||| | | || || || | |||||||||||| || Sbjct 331797 TTTGCCTTCACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCG 331738 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || Sbjct 331737 GTCAGGGTCTTGACGAAGATCTG 331715 Score = 127 bits (140), Expect = 5e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 ||||||| || || |||||| |||| |||||||||| || || | ||||| || | Sbjct 332195 CAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCATCCTCGA 332136 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| || || || ||||| ||||||||||| ||| ||| ||||| ||||||| Sbjct 332135 GCTGCTTGCCCGCAAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAA 332076 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| || |||| ||||| | | || || || | |||||| ||||||| Sbjct 332075 TCTTCGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATTGTCTTAC 332016 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||| || || ||||| || || Sbjct 332015 CCGTGAGGGTCTTGACAAAGATCTG 331991 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || | || |||||||| |||| ||| ||||| | | ||| | || || Sbjct 331695 AGGACGAGATGCAAGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTCC 331636 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | |||||||||||||| ||| || || || Sbjct 331635 TCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCT 331576 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| ||||| | | || || || | ||| |||||| Sbjct 331575 TGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTC 331516 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || |||||||| Sbjct 331515 TTGCCCGTGAGGGTCTTGACGAAAATTTG 331487 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || || |||||||||||||| |||| ||| ||||| | | || | || || || ||| Sbjct 331120 AGATGAAGAGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGC 331061 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| || ||||| || | |||||||||||| || |||||||| ||||||||| Sbjct 331060 TGCTTGCCCGCGAAAATCAAACGCTGCTGGTCGGGGGGGATTCCTTCCTTGTCCTGAATC 331001 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || ||| ||| |||| |||||| | | || || || | ||||||||||| || Sbjct 331000 TTCGCCTTGACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCA 330941 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || || Sbjct 330940 GTGAGGGTCTTTACGAAGATCTG 330918 Score = 104 bits (114), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| ||||||||||| || | ||| ||||||| | || | || ||||| |||||| Sbjct 331404 TGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCTTCGAGCTGC 331345 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || |||||||| | ||||||||||| || || || || ||||| ||||| Sbjct 331344 TTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 331285 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| |||| ||||| | || || || || | |||||||||||| || || Sbjct 331284 GCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCAGTC 331225 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | || ||||| || || || Sbjct 331224 AACGTCTTCACGAAGATCTG 331205 >seq1 Length=3205512 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||| |||||||||||||| |||| ||||||||| | | ||| Sbjct 2258193 CGAAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTC 2258134 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || || || || || ||||| || ||||| || || Sbjct 2258133 CGGCCATCCTCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCC 2258074 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || || |||| ||||| | | || || ||||| Sbjct 2258073 TCCTTATCCTGGATCTTCGCTTTGACATTATCGATTGTGTCGGACGACTCGACCTCCAAG 2258014 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || ||||||||||| || || Sbjct 2258013 GTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTG 2257976 Score = 113 bits (124), Expect = 1e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 ||||||| ||||| ||||| || || | |||||| || | | ||| | ||||| |||| Sbjct 2257895 CAAGGTGCAGAGTAGACTCTTTCTGAATGTTGTAATCGGAGAGAGTTCGCCCATCCTCCA 2257836 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||||| |||||||| | || |||||||| ||| ||| ||||| ||||||| Sbjct 2257835 ACTGCTTTCCAGCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAA 2257776 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||||||| || | ||||| | | || || || | ||||||||||| | Sbjct 2257775 TCTTCGCCTTCACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCC 2257716 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || | || || || ||||| || Sbjct 2257715 CTGTCAAGGTCTTTACGAAAATCTG 2257691 Score = 102 bits (112), Expect = 2e-16 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || ||| || ||||||||||| ||||| |||| ||||||||||| ||| || Sbjct 2257400 CGGAGGCGCAAGACGAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCAGACAATGTA 2257341 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 | ||||| || ||||| ||||| ||||| |||||||| || ||||| ||| Sbjct 2257340 CGGCCATCCTCGAGCTGTTTTCCAGCGAAAATGAGACGTTGTTGGTCGGGA 2257290 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| |||||||||||||| |||| |||||||| || |||| ||||| Sbjct 646898 AGGACCAGGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCGCTCAGTGTCCGGCCATCC 646957 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || ||||||||||| |||||||| || || Sbjct 646958 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCAGG 646998 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| || || || |||||||| |||| ||||| |||| | || | ||||| || | Sbjct 2257615 CAAGATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTCAA 2257556 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 |||| || || |||||||| |||||||||||||| ||| || || || ||||||| Sbjct 2257555 GCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAA 2257496 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| || |||| ||||| | | || || || | ||||| ||||| | Sbjct 2257495 TCTTCGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGC 2257436 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 |||| | || || || || || || Sbjct 2257435 CCGTCAATGTCTTGACGAAGATCTG 2257411 Score = 93.3 bits (102), Expect = 1e-13 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 |||||||| |||||||||||||| ||||| | ||| | ||||||||||| | |||||| Sbjct 2257817 ATCTTCGCTGGAAAGCAGTTGGAGGATGGGCGAACTCTCTCCGATTACAACATTCAGAAA 2257876 Query 200998 GAGTCTACTCTTCACCTTG 201016 ||||||||||| ||||||| Sbjct 2257877 GAGTCTACTCTGCACCTTG 2257895 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || ||||| || ||| || || | |||||| || | | || | || || |||| Sbjct 2258406 AGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCAAT 2258347 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| || || || || || || ||||||||||| || ||||| || |||||| Sbjct 2258346 TGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATC 2258287 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || |||||| |||| ||||| | | ||||| ||||||||||||||||| || Sbjct 2258286 TTCGCCTTCACATTATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATCGTCTTGCCT 2258227 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || || Sbjct 2258226 GTGAGGGTCTTGACGAAGATCTG 2258204 >seq8 Length=1834011 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || ||||| ||||||| ||| || || | || | || ||| Sbjct 422608 AGGACAAGGTGGAGGGTAGACTCTTTTTGGATGTTATAATCGCTGAGGGTGCGACCGTCT 422667 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||||||||| || || || ||||||||||| || Sbjct 422668 TCGAGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGGTCGGG 422708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921388530938