Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 199 5e-46 >seq2 Length=2818558 Score = 199 bits (220), Expect = 5e-46 Identities = 256/353 (73%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || || || || ||||| || |||||||| Sbjct 1486722 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCAGCAGTGGCCTTGACCTCGAAGATACCC 1486663 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | || ||||| || || || || || || || || ||||| ||| Sbjct 1486662 TCCTCGATGGTAAGAAGTGACACATCGAAAGTTCCTCCTCCGAGATCGAAGATGAGGACG 1486603 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| || ||||| |||||||||||||| || || || || || || || Sbjct 1486602 TTGCGCTCGCCGGTCACCTTCTTGTCGAGACCGTACGCAATGGCGGCAGCGGTGGGCTCG 1486543 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || |||||||| ||||| || | ||| ||| | || || || || || || || Sbjct 1486542 TTGATGATACGAAGGATGTTCATTCCGGAAATGGTTCCGGCGTCCTTGGTAGCCTGGCGC 1486483 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||||||||| || |||||||| ||||| || | |||||| || | ||||| Sbjct 1486482 TGCGAGTCGTTAAAGTACGCGGGGACCGTCACGACGGCATTCGTGACGGTCGTGCCGAGG 1486423 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || ||| | || ||||| || ||||||||||| || |||||||| Sbjct 1486422 TAGGACTCAGCGGTCTCCTTCATCTTCAAGAGAACCATCGAGGAGATCTCTTC 1486370 Score = 143 bits (158), Expect = 3e-29 Identities = 268/388 (69%), Gaps = 8/388 (2%) Strand=Plus/Plus Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398 ||| ||||| || |||||||| || | | || || || || ||||| |||| | | Sbjct 828376 CGTGCGCTTGGCACGCTCACAAGCGCTCCTCAATCGCCGGAGCGCACGGGGGTCGTCCGC 828435 Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAG-GAGTCTCGAA 7456 || || ||| || || | ||||| | |||||| || ||| | || | | Sbjct 828436 GATGTCGAGCTTCGTCTTGCGCTGGAACTCCTTCTTGAAGTGCTCCAAGAGGGTGTTG-- 828493 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || ||||| || ||||| | |||| ||| Sbjct 828494 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTAGCCTTGACGGCGAAGACACCG 828553 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||||| | | ||| ||||| || || || ||||| || || || ||||| ||| Sbjct 828554 CCGCTGATGTTGAGGAGCGAGACATCGAAGGTTCCTCCACCGAGATCGAAGATGAGGACG 828613 Query 7577 TTCGTATCGTCGTCTTTGTT--CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || ||| ||||| | | || ||||||||||| ||||| || || || || || | Sbjct 828614 TTGCGCTCG--GTCTTCGATTGCTGGTCGAGACCGTATGCGATGGCGGCGGCGGTGGGCT 828671 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || || ||||| || || ||||||||||| | | || || || ||||| | | Sbjct 828672 CGTTGATGATACGGAGCACGTCGAGGCCAGCAATGGCGCCGGCGTCCTTGGTCGCGAGAC 828731 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 | ||||| ||||| |||||||| ||||| Sbjct 828732 GCTGCGAGTCGTTGAAGTAGGCAGGGAC 828759 Score = 93.3 bits (102), Expect = 5e-14 Identities = 112/152 (74%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| |||||||||| || |||||||| || || || ||||||||||| || Sbjct 1486103 GTGTTGATGGGGTTCATCGCCACCTGGTTCTTTGCGGCATCACCGATAAGACGCTC---G 1486047 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 || || | || | ||| || || || ||||| || || || || |||||||| || || Sbjct 1486046 TTGTCGGAGAAGGAGACATATGAGGGAGTCGTGCGGTTACCCTGATCGTTCGCGATGATC 1485987 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || |||||||| ||||| || || ||||| Sbjct 1485986 TCGACACGGTCGTTCTGCCACACACCCACGCA 1485955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132688851760