Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 118 8e-22 seq6 95.1 1e-14 >seq1 Length=3205512 Score = 118 bits (130), Expect = 8e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||||||||| || || || ||||||||||| | | || | |||| || | || Sbjct 2257611 ATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTCAAGCTG 2257552 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||||| || || || | |||||| || ||||| || || || || || || ||||| || Sbjct 2257551 TTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTT 2257492 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | |||||| || | |||||||||||||||| || ||||| || Sbjct 2257491 CGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCCGT 2257432 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 || || || || || ||||||||| Sbjct 2257431 CAATGTCTTGACGAAGATCTGCATG 2257407 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || || || || || || ||||| |||| | || | | |||| || | ||| Sbjct 2258175 TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCCTCGAGCTGC 2258116 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | ||||||||||| || || ||||| || ||||| || || || Sbjct 2258115 TTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGGATCTTC 2258056 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | ||||| |||| || || || | |||| || ||||| || Sbjct 2258055 GCTTTGACATTATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTGCCAGTC 2257996 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| ||||| |||||||| Sbjct 2257995 AGGGTTTTCACAAAGATCTGCAT 2257973 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| ||||| || || |||||||| | | || | | || |||||||| Sbjct 2258404 ATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCAATTG 2258345 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||| || || || || ||||| |||||||| || |||||||| || Sbjct 2258344 CTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATCTT 2258285 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | ||||| || | || || || | |||| ||| ||||| || Sbjct 2258284 CGCCTTCACATTATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATCGTCTTGCCTGT 2258225 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 | || || || || |||||||| |||||||| Sbjct 2258224 GAGGGTCTTGACGAAGATCTGCATACCGCCGCGAAGA 2258188 >seq6 Length=2299419 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | || ||| | || | ||| | ||| || || || || || || || |||| | Sbjct 331710 CCTCCACGTAGACGAAGGACGAGATGCAAGGTGGACTCCTTCTGGATGTTATAGTCGGAG 331651 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | | || || | ||||| || || || ||||| ||||| || || || ||| Sbjct 331650 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGA 331591 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || ||||||||||| || || || | || | |||||||| | || || Sbjct 331590 ATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACC 331531 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | ||| ||||| || | || || || || || ||||| Sbjct 331530 TCGAGCGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 331484 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| || || || || || || || || || | | || | | | || || | || Sbjct 331118 ATGAAGAGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTG 331059 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || ||||||||||| || ||||| || || ||||| || || ||||| || Sbjct 331058 CTTGCCCGCGAAAATCAAACGCTGCTGGTCGGGGGGGATTCCTTCCTTGTCCTGAATCTT 330999 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||||| || | ||||| || || |||| ||| || || || Sbjct 330998 CGCCTTGACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCAGT 330939 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || ||||| || ||||||||| Sbjct 330938 GAGGGTCTTTACGAAGATCTGCATG 330914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278332384998