Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 226 4e-54 seq6 168 9e-37 seq2 165 1e-35 >seq1 Length=3205512 Score = 226 bits (250), Expect = 4e-54 Identities = 188/230 (82%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||||||||||||||| ||||| || || |||||| | ||||| ||||||| Sbjct 2257971 GTATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCGT 2258030 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | |||||||||||||| ||||||| ||||| || |||||||| ||||| ||||| |||| Sbjct 2258031 CCGACACAATCGATAATGTCAAAGCGAAGATCCAGGATAAGGAGGGCATCCCACCGGATC 2258090 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | || || ||||||||||| || || ||||| || ||||| || ||||| | || |||| Sbjct 2258091 AACAGCGCCTTATTTTTGCGGGCAAGCAGCTCGAGGATGGCCGGACCCTTTCCGACTACA 2258150 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | || |||||||| ||||| |||||||| || | ||||| || ||| Sbjct 2258151 ACATCCAGAAGGAGTCGACTCTTCACCTTGTCCTCCGTCTTCGCGGCGGT 2258200 Score = 168 bits (186), Expect = 9e-37 Identities = 162/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||| | || || || || ||||| |||||||| ||||| || Sbjct 2257688 ATGCAGATTTTCGTAAAGACCTTGACAGGGAAGACGATCACTCTCGAGGTCGAGTCTTCG 2257747 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || || |||||||| || |||||||| ||||| ||||| ||| Sbjct 2257748 GACACTATTGACAACGTGAAGGCGAAGATTCAGGACAAGGAAGGGATTCCTCCCGACCAG 2257807 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| | || || ||||| || ||| | || ||||| || || ||| | ||||||||| Sbjct 2257808 CAACGGTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGGCGAACTCTCTCCGATTACAAC 2257867 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTG 172069 |||| || ||||||||||| ||||||| Sbjct 2257868 ATTCAGAAAGAGTCTACTCTGCACCTTG 2257895 Score = 163 bits (180), Expect = 4e-35 Identities = 161/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || | || || || || ||||| || || || ||||| || Sbjct 2257408 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACTCTTGAAGTGGAGTCTTCG 2257467 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| || |||||||| || ||||| || || || ||||| ||| Sbjct 2257468 GACACTATCGACAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAG 2257527 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| || ||||||||||||||||| ||||| || || || |||||||||| Sbjct 2257528 CAGCGTCTTATCTTCGCTGGTAAACAGCTTGAGGATGGGCGCACGCTTTCTGATTACAAT 2257587 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTG 172069 | || ||||||||||| || || |||| Sbjct 2257588 ATCCAGAAGGAGTCTACCCTTCATCTTG 2257615 Score = 147 bits (162), Expect = 3e-30 Identities = 149/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || ||||| || || || || ||||| | ||||| ||||| | Sbjct 2258199 GTATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACGATCACGTTGGAGGTAGAGTCTT 2258258 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| |||||||| | || || ||||||||||| ||||||||||| || || || | Sbjct 2258259 CGGACACGATCGATAATGTGAAGGCGAAGATTCAAGACAAGGAAGGCATCCCGCCGGACC 2258318 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 ||||||| || |||||||| || || || | || || || || || || | ||||||| Sbjct 2258319 AGCAACGCCTGATTTTTGCGGGCAAGCAATTGGAGGACGGTCGCACACTTTCGGATTACA 2258378 Query 172040 ACGTTCAAAAGGAG 172053 || |||| || ||| Sbjct 2258379 ACATTCAGAAAGAG 2258392 Score = 140 bits (154), Expect = 4e-28 Identities = 335/500 (67%), Gaps = 9/500 (2%) Strand=Plus/Minus Query 198450 TTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTT 198509 |||||||| || | || || ||| || ||||| ||| || |||| |||| | || Sbjct 2072641 TTCAAGGACGTCGCAGGCATGGACGAGGCCAAGGAGGAGATCATGGAGTTTGTCAAATTC 2072582 Query 198510 CTTAAAAACCCCGAAAAGTACTATGGAAG-TGGTGCCCGA-ATCCCACGTGGTGCTCTTC 198567 || || ||||| || ||| | ||| ||| | | | ||||| || ||||| | | Sbjct 2072581 CTCAAGGACCCCACCAAATACGAA--AAGCTGGGGGCTAAGATCCCTCGCGGTGCCATCC 2072524 Query 198568 TCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGA 198627 || |||| | || ||||| || || || | || ||| || | ||| || ||| ||| Sbjct 2072523 TCTCCGGACCTCCTGGTACGGGAAAGACGTTACTTGCTAAGGCCACCGCCGGCGAAGCGA 2072464 Query 198628 GTGTCCCCTTTCT-TCAGTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGT 198686 | ||||| || || || || ||||| | ||| ||||||||||||| ||||||||| Sbjct 2072463 GCGTCCCTTTCCTCTCCGT-CTCCGGTTCCGAATTCGTCGAGATGTTCGTCGGTGTTGGT 2072405 Query 198687 GCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTC 198746 | ||| || || || || || | | || ||||| || || ||||||||| Sbjct 2072404 TCCTCGCGTGTACGCGACCTTTTCGCGTCCGCGAAGAAAAATGCCCCTTGCATCATCTTC 2072345 Query 198747 ATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGG---TGGAACTACTACACCTGGTAAT 198803 || ||||| |||||||| |||||||| || || ||| | | ||| || Sbjct 2072344 ATCGATGAAATTGACGCCATTGGTAAGTCACGCGGAAAGGGAGGCAACATGGGTGGGAAC 2072285 Query 198804 GATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGACAATGAG 198863 || ||||| ||| |||| | |||||||| || |||||||||||||||| || || Sbjct 2072284 GACGAGCGCGAGTCGACGCTCAACCAGCTCCTTGTCGAGATGGATGGTTTTGGCACACAG 2072225 Query 198864 ACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTT 198923 | |||| || | || | || |||||| |||| |||| || ||||| | Sbjct 2072224 CAGCATGTCGTCGTATTAGCCGGCACCAATAGGCCTGATGTCCTCGACCCCGCACTCATG 2072165 Query 198924 CGTCCCGGTCGATTCGACCG 198943 |||||||| || |||||||| Sbjct 2072164 CGTCCCGGCCGGTTCGACCG 2072145 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||||| || || || || |||||||| ||||| ||||| || Sbjct 647170 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCT 647111 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| || ||||||||||||| || || |||||||| Sbjct 647110 GACACCATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGG 647067 Score = 89.7 bits (98), Expect = 7e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || || || || || || ||||| || ||||||||||| || Sbjct 2257128 ATGCAGATCTTCGTTAAGACTCTCACCGGCAAGACCATCACACTTGAGGTTGAGTCTTCC 2257187 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || || ||||| || |||| ||||||||||| |||||||| || Sbjct 2257188 GATACCATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGG 2257231 >seq6 Length=2299419 Score = 168 bits (186), Expect = 9e-37 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| ||||| || || |||||||||||||| ||||| || Sbjct 330915 ATGCAGATCTTCGTAAAGACCCTCACTGGGAAGACGATCACCCTCGAGGTGGAGTCTTCG 330974 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||||||| |||| || |||||||| || |||||||| || || ||||| ||| Sbjct 330975 GACACCATCGATAACGTCAAGGCGAAGATTCAGGACAAGGAAGGAATCCCCCCCGACCAG 331034 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | ||||| || || || ||||| || || || || ||||| | || || ||| Sbjct 331035 CAGCGTTTGATTTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTATAAC 331094 Query 172042 GTTCAAAAGGAGTCTACTCTACACCT 172067 | || |||||||| ||||| || || Sbjct 331095 ATCCAGAAGGAGTCGACTCTTCATCT 331120 Score = 152 bits (168), Expect = 7e-32 Identities = 155/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| || || || ||||| || || || || || || |||||||| |||| Sbjct 331479 GTGGTATGCAAATTTTCGTCAAGACCCTCACGGGCAAGACGATTACGCTCGAGGTCGAGT 331538 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||||||| | || || ||||||||||||||||| |||||||| || | Sbjct 331539 CTTCTGACACGATCGATAACGTGAAGGCGAAGATTCAAGATAAGGAGGGCATTCCCCCGG 331598 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || | || || || || || ||||| || || || || || ||| | || | Sbjct 331599 ACCAGCAGCGCTTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCCGACT 331658 Query 172037 ACAACGTTCAAAAGGAGTCTAC 172058 | ||| | || |||||||| || Sbjct 331659 ATAACATCCAGAAGGAGTCCAC 331680 >seq2 Length=2818558 Score = 165 bits (182), Expect = 1e-35 Identities = 250/356 (70%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 |||||||| || || || ||||| | | |||||||||||||| || || || | | | Sbjct 1486367 CCCGAAGAGATCTCCTCGATGGTTCTCTTGAAGATGAAGGAGACCGCTGAGTCCTACCTC 1486426 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || | || || | |||| || ||||| || || || ||||| | || || || || Sbjct 1486427 GGCACGACCGTCACGAATGCCGTCGTGACGGTCCCCGCGTACTTTAACGACTCGCAGCGC 1486486 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||||| || |||||||| | | ||| | || | ||| ||| | || ||||| || Sbjct 1486487 CAGGCTACCAAGGACGCCGGAACCATTTCCGGAATGAACATCCTTCGTATCATCAACGAG 1486546 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || ||||| || ||||| |||||||| | || || || || Sbjct 1486547 CCCACCGCTGCCGCCATTGCGTACGGTCTCGACAAGAAGGTGACCGGCGAGCGCAACGTC 1486606 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 | ||||| |||||||| || || || || ||||| |||||||| | || || | ||| Sbjct 1486607 CTCATCTTCGATCTCGGAGGAGGAACTTTCGATGTGTCACTTCTTACCATCGAGGAGGGT 1486666 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| || ||||| ||||||||||| || || | |||||||| || || || Sbjct 1486667 ATCTTCGAGGTCAAGGCCACTGCTGGTGACACCCACTTGGGTGGTGAGGACTTTGA 1486722 Score = 113 bits (124), Expect = 6e-20 Identities = 189/271 (70%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780 ||| ||||| ||||||| || || || || | ||||| |||||||| | || ||||| Sbjct 828760 TGTCCCTGCCTACTTCAACGACTCGCAGCGTCTCGCGACCAAGGACGCCGGCGCCATTGC 828701 Query 195781 GGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || || || | || ||||| || || || || || || || || || ||||| Sbjct 828700 TGGCCTCGACGTGCTCCGTATCATCAACGAGCCCACCGCCGCCGCCATCGCATACGGTCT 828641 Query 195841 GGACAAGAACAAGGACGAAGATAAA----AATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 ||| || ||| |||||| | || || | ||||| ||||||||||| || | Sbjct 828640 CGACCAG--CAAT--CGAAGACCGAGCGCAACGTCCTCATCTTCGATCTCGGTGGAGGAA 828585 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | || |||||||| || ||||| || || ||| | |||| || |||||||| || | Sbjct 828584 CCTTCGATGTCTCGCTCCTCAACATCAGCGGCGGTGTCTTCGCCGTCAAGGCTACCGCCG 828525 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| || || | |||||||| || || || Sbjct 828524 GTGACACCCACTTGGGTGGTGAGGACTTTGA 828494 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391 || || ||||| ||||| || || ||||| ||||| ||| |||| || || || ||||| Sbjct 1485955 TGCGTGGGTGTGTGGCAGAACGACCGTGTCGAGATCATCGCGAACGATCAGGGTAACCGC 1486014 Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451 || ||||| || || || |||| | || || || ||||| | || ||||||||||| Sbjct 1486015 ACGACTCCCTCATATGTCTCCTTCTCCGACAACGAGCGTCTTATCGGTGATGCCGCAAAG 1486074 Query 195452 AATCAGACAGCTATGAACCCTATCAATAC 195480 || ||| || |||||||| ||||| || Sbjct 1486075 AACCAGGTGGCGATGAACCCCATCAACAC 1486103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862284874080