Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq6 129 4e-25 seq1 114 8e-21 >seq6 Length=2299419 Score = 129 bits (142), Expect = 4e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||||||||||||||| || || ||||| || ||| |||| |||| || || Sbjct 332193 AGGTGAAGGGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCATCCTCGAGC 332134 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || || || || || || |||||||| | || | ||| |||||||| | || Sbjct 332133 TGCTTGCCCGCAAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATC 332074 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || ||||| | |||| || | |||||| || | || || ||||| ||| Sbjct 332073 TTCGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATTGTCTTACCC 332014 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||||||| |||||||||||||| Sbjct 332013 GTGAGGGTCTTGACAAAGATCTGCAT 331988 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || |||||||| || |||| |||| || |||||||| |||||||| Sbjct 331903 CTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCGGCGAA 331844 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || || |||||||| |||| | ||||||||||| | || ||| || ||| Sbjct 331843 AATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTTGCCTTCACGTT 331784 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| ||| | |||||| || | || || ||||| || || |||||||| || Sbjct 331783 GTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 331724 Query 34966 AAAGATCTGCATG 34978 |||||||||||| Sbjct 331723 GAAGATCTGCATG 331711 Score = 114 bits (126), Expect = 8e-21 Identities = 144/197 (73%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| |||||||||||||| ||| |||| | || || || ||||| || ||||| Sbjct 331106 CTCCTTCTGGATGTTATAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 331047 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || |||||||| | || | || |||||||| | || || ||||| Sbjct 331046 AATCAAACGCTGCTGGTCGGGGGGGATTCCTTCCTTGTCCTGAATCTTCGCCTTGAC--- 330990 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | ||||||| || | ||| || || | ||| || ||||| || |||||||||| Sbjct 330989 -GTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATCGTCTTCCCAGTGAGGGTCT 330931 Query 34962 TTACAAAGATCTGCATG 34978 |||| |||||||||||| Sbjct 330930 TTACGAAGATCTGCATG 330914 Score = 114 bits (126), Expect = 8e-21 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||||||||| || ||| |||| | || || || ||||| || ||||| Sbjct 331393 CTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAA 331334 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || |||||||| | || | ||||||||||| | || || |||||| Sbjct 331333 GATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 331274 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| ||| | ||| || || | || || |||||||| || | ||||| || Sbjct 331273 ATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCAGTCAACGTCTTCAC 331214 Query 34966 AAAGATCTGCATG 34978 |||||||||||| Sbjct 331213 GAAGATCTGCATG 331201 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||||||||| ||||||||||| || || |||| | || Sbjct 331695 AGGACGAGATGCAAGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTCC 331636 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| || |||||||| | || | |||||||| || Sbjct 331635 TCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCT 331576 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| ||| | |||||| || | || || ||| Sbjct 331575 TGAATCTTCGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTC 331516 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||||||||| || || || ||||| Sbjct 331515 TTGCCCGTGAGGGTCTTGACGAAAATTTGCAT 331484 >seq1 Length=3205512 Score = 114 bits (126), Expect = 8e-21 Identities = 154/212 (73%), Gaps = 8/212 (4%) Strand=Plus/Minus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 |||| || | ||||||||| ||||||||||| || ||||| || |||| | || |||| Sbjct 2258408 CCAGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCA 2258349 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 |||||| || || || ||||| ||||||||||| |||| | || |||||||| | | Sbjct 2258348 ATTGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAA 2258289 Query 34890 TTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || ||||||| || | ||| || || | || || ||| Sbjct 2258288 TCTTCGCCTTCAC--AT--TATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATCGTC 2258233 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || ||||||||||| Sbjct 2258232 TTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 2258201 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| || ||||||||| ||||| ||||| || ||| | || |||| Sbjct 2258184 AGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCATCC 2258125 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || || || || || || || || | || | |||||||| || Sbjct 2258124 TCGAGCTGCTTGCCCGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCC 2258065 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGC----CTCGACATCAACGGTTAT 34941 | || || |||||| || |||||||| | | |||||| || | ||| || Sbjct 2258064 TGGATCTTCGCTTTGAC--AT--TATCGATTGTGTCGGACGACTCGACCTCCAAGGTGAT 2258009 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || || ||||| || |||||||||||||| Sbjct 2258008 GGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 2257973 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||||||||| || || || || | ||| |||| |||| |||||||| ||||| Sbjct 2257879 CTCTTTCTGAATGTTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCAGCGAA 2257820 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||||||||||| | || | ||| |||||||| | || || || ||| Sbjct 2257819 GATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTCACGTT 2257760 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | |||||| || | || || ||||| || || | ||||||||| Sbjct 2257759 GTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCTGTCAAGGTCTTTAC 2257700 Query 34966 AAAGATCTGCATG 34978 || ||||||||| Sbjct 2257699 GAAAATCTGCATG 2257687 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 8/211 (4%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || |||| ||| ||||||||| || || || || || || ||||| |||| || || Sbjct 2257613 AGATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTCAAGC 2257554 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 || || || |||||||| || || |||||||| | || | ||||||||||| | || Sbjct 2257553 TGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATC 2257494 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 || ||||| || | ||||| || | ||| || |||| || |||||||| Sbjct 2257493 TTCGCCTTGAC--AT--TGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTT 2257438 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| | ||||| || |||||||||||| Sbjct 2257437 GCCCGTCAATGTCTTGACGAAGATCTGCATG 2257407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692744428666