Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq14 89.7 4e-12 >seq14 Length=1043118 Score = 89.7 bits (98), Expect = 4e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 282338 TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGA 282397 ||||| |||||||| | || ||||| || || ||||| || | | | ||| | |||| Sbjct 547859 TCAAGGCCATACGCGAGCGCTGCAGCCGTAGGCTCATTGATGACACGGAGAACTTCAAGA 547800 Query 282398 CCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGA 282457 |||||||| || ||||| ||||| ||||||| |||| ||||| || || |||||| Sbjct 547799 CCAGCAATCTGACCAGCATCCTTAGTCGCTTGTCGCTGTGCGTCGTTGAAGTAAGCAGGA 547740 Query 282458 ACAGTAATAACGGC 282471 ||||| | ||| || Sbjct 547739 ACAGTGACAACTGC 547726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629712659164