Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 seq1 122 8e-23 >seq6 Length=2299419 Score = 127 bits (140), Expect = 2e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||||||| |||| | |||||||||||||| ||||| |||||||| Sbjct 331070 GTCCTCGAGCTGCTTGCCCGCGAAAATCAAACGCTGCTGGTCGGGGGGGATTCCTTCCTT 331011 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||| ||||| | || | ||||| | | |||||| |||| ||||| Sbjct 331010 GTCCTGAATCTTCGCCTTGACGTTATCGATGGTGTCCGAAGACTCCACCTCGAGGGTGAT 330951 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 || || || || || || |||||||| ||||||||| || Sbjct 330950 CGTCTTCCCAGTGAGGGTCTTTACGAAGATCTGCATGTCT 330911 Score = 127 bits (140), Expect = 2e-24 Identities = 151/202 (75%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||| || | ||| | | | |||||||| |||||||| Sbjct 331908 GTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCA-TCCTCGAGTTGCTTGCC 331850 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| ||||||||||| || ||||| || |||||||| |||||| ||| Sbjct 331849 GGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTTGCCTT 331790 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||| | | ||| || |||| |||| || ||||||||||| || Sbjct 331789 CACGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 331730 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || ||||| ||||||||| || Sbjct 331729 CTTGACGAAGATCTGCATGCCT 331708 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| |||||||| || || ||| ||| | |||||||||||||||| Sbjct 332185 GGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCA-TCCTCGAGCTGCTTGC 332127 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 |||| ||||||| ||||||||||||||||| || ||||||||||| ||||| || Sbjct 332126 CCGCAAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCT 332067 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | |||||| | | ||| || |||| |||| || || || || || | Sbjct 332066 TGACATTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATTGTCTTACCCGTGAGGG 332007 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 332006 TCTTGACAAAGATCTGCAT 331988 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| ||||| ||||| || || || || | ||| ||| |||||| Sbjct 331407 AAATGGAGGGTCGACTCCTTCTGAATGTTATAGTCAGAAAGGGTGCGGCCGTCTTCGAGC 331348 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||||||| | || | ||||||||||| || |||||||| |||||||| |||| Sbjct 331347 TGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATC 331288 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | |||||| | | |||||| |||| |||| || || || Sbjct 331287 TTGGCCTTGACGTTATCGATCGTGTCAGATGACTCCACCTCGAGCGTGATCGTCTTTCCA 331228 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 |||| || || ||||| ||||||||| || Sbjct 331227 GTCAACGTCTTCACGAAGATCTGCATGCCT 331198 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| ||||| || || || ||| | ||| |||||||||||| Sbjct 331687 ATGCAAGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTCCTCGAGCTG 331628 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||||||| | || | ||||||||||| || || ||||| ||||| || ||||| Sbjct 331627 CTTGCCCGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTT 331568 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | |||||| | | ||| || |||| || | || ||||| || Sbjct 331567 CGCCTTCACGTTATCGATCGTGTCAGAAGACTCGACCTCGAGCGTAATCGTCTTGCCCGT 331508 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||||||| ||||| Sbjct 331507 GAGGGTCTTGACGAAAATTTGCAT 331484 >seq1 Length=3205512 Score = 122 bits (134), Expect = 8e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| ||||||||||| | |||| | ||||| ||||| Sbjct 2257611 ATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTCAAGCTG 2257552 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 || || ||| | || || |||||||||||||||||||| || |||||||| ||||| Sbjct 2257551 TTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTT 2257492 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | ||||| | | |||||| || | |||| ||| ||||| || Sbjct 2257491 CGCCTTGACATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCTTGCCCGT 2257432 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 || || || ||||| ||||||||| Sbjct 2257431 CAATGTCTTGACGAAGATCTGCATG 2257407 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | || | | | ||||||||||||||||| Sbjct 2258169 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCGGCCA-TCCTCGAGCTGCTTGCC 2258111 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||| || || || |||||||| ||||| || |||||| || Sbjct 2258110 CGCAAAAATAAGGCGCTGTTGATCCGGTGGGATGCCCTCCTTATCCTGGATCTTCGCTTT 2258051 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | ||| || || | ||||| ||| ||||| ||||| || Sbjct 2258050 GACATTATCGATTGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGGGT 2257991 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| || || |||||||| Sbjct 2257990 TTTCACAAAGATCTGCAT 2257973 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || ||||||||| | || | ||||| | |||||| || Sbjct 2257884 GTAGACTCTTTCTGAATGTTGTAATCGGAGAGAGTTCGCCCATCCTCCAACTGCTTTCCA 2257825 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | ||| |||||||||||||| || ||||||||||| ||||| ||| Sbjct 2257824 GCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTC 2257765 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | ||| || |||| |||| || || || |||| || Sbjct 2257764 ACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTCCCTGTCAAGGTC 2257705 Query 133644 TTTACGAAAATCTGCATG 133661 |||||||||||||||||| Sbjct 2257704 TTTACGAAAATCTGCATG 2257687 Score = 109 bits (120), Expect = 5e-19 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | |||| ||||||||| || |||||||| | | ||| ||| |||||| | Sbjct 2258404 ATGGAGGGTGCTCTCTTTCTGAATGTTGTAATC--CGAAAGTGTGCGACCGTCCTCCAAT 2258347 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||||||||| |||| || || |||||||| || ||||||||||||||||| ||| Sbjct 2258346 TGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATC 2258287 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | |||||| | | ||| || || | |||| || ||||| Sbjct 2258286 TTCGCCTTCACATTATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATCGTCTTGCCT 2258227 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| |||||||| Sbjct 2258226 GTGAGGGTCTTGACGAAGATCTGCAT 2258201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420715401360