Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001458015.1_202015- 11-03] 14 sequences; 26,844,330 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 132 3e-26 seq6 93.3 3e-14 >seq1 Length=3205512 Score = 132 bits (146), Expect = 3e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33542 CCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCA 33601 ||| ||| || ||||||||||| || ||||||||||| || |||||||| |||| |||| Sbjct 2258408 CCAGATGGAGGGTGCTCTCTTTCTGAATGTTGTAATCCGAAAGTGTGCGACCGTCCTCCA 2258349 Query 33602 ATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAA 33661 |||| || || |||||||||| || ||||| || |||| | ||||| ||||| || Sbjct 2258348 ATTGCTTGCCCGCAAAAATCAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAA 2258289 Query 33662 TTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTA 33720 | ||| |||| ||| || | ||||| || || || || | ||||||||| || Sbjct 2258288 TCTTCGCCTTCA-CATTATCGATCGTGTCCGAAGACTCTACCTCCAACGTGATCGTCTTG 2258230 Query 33721 CCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||||| | || || || |||||||||||| Sbjct 2258229 CCTGTGAGGGTCTTGACGAAGATCTGCATA 2258200 Score = 105 bits (116), Expect = 4e-18 Identities = 153/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 33540 CACCAAA-TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598 |||||| || ||||| |||||| || ||||||||||||||||| || || | || | Sbjct 2257898 CACCAAGGTGCAGAGTAGACTCTTTCTGAATGTTGTAATCGGAGAGAGTTCGCCCATCCT 2257839 Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658 |||| || ||||| || || ||||| || ||||| || | || | ||||| ||||| Sbjct 2257838 CCAACTGCTTTCCAGCGAAGATCAACCGTTGCTGGTCGGGAGGAATCCCTTCCTTGTCCT 2257779 Query 33659 CAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 ||| ||| ||| || | ||| | ||||| || || || || | |||||||| Sbjct 2257778 GAATCTTCGCCTTC-ACGTTGTCAATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTC 2257720 Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || ||||| || || ||||| || |||||||| Sbjct 2257719 TTCCCTGTCAAGGTCTTTACGAAAATCTGCAT 2257688 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 33541 ACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| || || ||| || || || |||||||| || || ||||| | || || Sbjct 2257617 ACCAAGATGAAGGGTAGACTCCTTCTGGATATTGTAATCAGAAAGCGTGCGCCCATCCTC 2257558 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | ||||| || || || || | ||||||||| || | || | ||| || ||||| Sbjct 2257557 AAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTG 2257498 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||| ||| || | ||| ||| | ||||| || ||||| |||| ||||| || | Sbjct 2257497 AATCTTCGCCTTGA-CATTGTCGATAGTGTCCGAAGACTCCACTTCAAGAGTGATGGTCT 2257439 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || || || ||||||||||| Sbjct 2257438 TGCCCGTCAATGTCTTGACGAAGATCTGCAT 2257408 >seq6 Length=2299419 Score = 93.3 bits (102), Expect = 3e-14 Identities = 155/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 33529 CTCAAACGTAACACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGT 33587 |||||||| |||| | ||| ||||| ||| || || ||||| || || || || || Sbjct 331133 CTCAAACG---CACCGAGATGAAGAGTCGACTCCTTCTGGATGTTATAGTCCGAAAGGGT 331077 Query 33588 GCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACC 33647 ||| |||| || | || || || || ||||||||||||||||| || | || | || Sbjct 331076 GCGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAAACGCTGCTGGTCGGGGGGGATTCC 331017 Query 33648 TTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCACGTCAAC 33707 ||| ||||| ||| ||| || | || | |||||| || ||||| || | Sbjct 331016 TTCCTTGTCCTGAATCTTCGCCTTGACGTTATCGATGGTGTCCGAAGACTCCACCTCGAG 330957 Query 33708 CGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||||||| || || || | || ||||| ||||||||||| Sbjct 330956 GGTGATCGTCTTCCCAGTGAGGGTCTTTACGAAGATCTGCAT 330915 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 33540 CACCAAA-TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598 |||||| || || |||||||| || || || ||||| || || || ||||| | || | Sbjct 332198 CACCAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAGTCAGACAGGGTGCGACCATCCT 332139 Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658 | | || || || |||||||| | |||||||| || | || | ||||| ||||| Sbjct 332138 CGAGCTGCTTGCCCGCAAAAATGAGGCGCTGCTGGTCGGGAGGAATCCCTTCCTTGTCCT 332079 Query 33659 CAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 ||| ||| || | ||| ||| | ||||| || || || || | |||||| || Sbjct 332078 GAATCTTCGCCTTGA-CATTGTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATTGTC 332020 Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| || | || || |||||||||||||| Sbjct 332019 TTACCCGTGAGGGTCTTGACAAAGATCTGCAT 331988 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| ||||| ||| || || || ||||| || || || |||||| | || || | ||| Sbjct 331915 ATGAAGAGTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGTCCATCCTCGAGTTG 331856 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || ||||| ||||| | |||||||| || |||| | ||| || ||||| ||| || Sbjct 331855 CTTGCCGGCGAAAATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTT 331796 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 |||| | | ||| | ||||| || || || || | ||||||||| || || | Sbjct 331795 TGCCTTCA-CGTTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCGG 331737 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | | || || || ||||||||||| Sbjct 331736 TCAGGGTCTTGACGAAGATCTGCAT 331712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703943914880