Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 1e-14 >seq7 Length=1099351 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 16181 TTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATA 16240 || ||||| |||| | || || || |||||| || || |||||||| | | ||| Sbjct 134373 TTGAGGTGGGTAAAGAGGAGGCAGGCAAAGTCGGTGTGGAGACCTTCGTCACGGGAGATG 134432 Query 16241 AGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCA 16300 || ||||||||||| || | ||| ||||| || || ||||| | |||||| || | | Sbjct 134433 AGCTCGTTGGAAAAGGTGAGCCCGGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAA 134492 Query 16301 GCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360 ||||| || || || ||||| || ||||| || | |||||||| || | || || || Sbjct 134493 GCAAAGGAGCCAGAGAAGAAGATGCCCTCGACGGCGGCAAAAGCAATCAGGCGCTCGGCA 134552 Query 16361 TACGT 16365 |||| Sbjct 134553 AACGT 134557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414189041560