Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 8e-14 >seq7 Length=1099351 Score = 93.3 bits (102), Expect = 8e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 |||| ||||| || || || || |||||||| ||| | || || ||||| |||||| Sbjct 134538 TTGCTTTTGCCGCCGTCGAGGGCATCTTCTTCTCTGGCTCCTTTGCTTCCATCTTCTGGC 134479 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 ||||||| | || | |||| || ||||||| ||||| ||| |||| || | |||| Sbjct 134478 TCAAGAAGCGTGGGCTCATGCCCGGGCTCACCTTTTCCAACGAGCTCATCTCCCGTGACG 134419 Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 ||||||| || ||||||||| ||| | || || Sbjct 134418 AAGGTCTCCACACCGACTTTGCCTGCCTCCTCTT 134385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583581591515