Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 5e-14 >seq6 Length=1191995 Score = 93.3 bits (102), Expect = 5e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 33564 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623 ||||| | | | ||||| || |||||||| || || || || | ||| || | | Sbjct 859617 AAATGATCATAGATCAAGCAAGCGAAATCCGTATGTGTTCCTTCATCACGACTGATGAGT 859558 Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683 || || ||||| || | || ||||| ||||| ||||| || ||||| || |||| ||| Sbjct 859557 TCATTGGAAAAGGTCAAGCCCGGCATCAGGCCTCGCTTCTTTAGCCAGAAGATGGCGGCG 859498 Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTAC 33712 ||||| |||||||||||||| ||||| || Sbjct 859497 AATGAACCGGAAAAGAAGATACCTTCGAC 859469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817340200240