Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 5e-12 >seq3 Length=1400765 Score = 86.0 bits (94), Expect = 5e-12 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 ||||| || | ||| | |||||| |||||||| ||||||| | | | || || Sbjct 1003789 AGGGGCTCGATGTGATCGTTGTACACGTGGGCATCACCCATTTGGAGGATGAATTCGTG- 1003731 Query 20985 GGGGTCAGGCCC-GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTT 21043 ||| || ||| |||| ||| || |||| | ||| |||||||||||| ||||||||| Sbjct 1003730 GGGCTCGCACCCTGTGATGTGTGCAATCATGTGCGTGAGGAGGGCGTAGGAGGCGATGTT 1003671 Query 21044 AAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCT 21099 || || || |||||||| | |||| || | ||||||| | ||||| ||||| Sbjct 1003670 GAAGGGAACACCGAGGCCGACGTCGCATGAACGTTGGTACATCAGGCAGCTCAGCT 1003615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775827953840