Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq13 87.8 4e-12 >seq13 Length=562416 Score = 87.8 bits (96), Expect = 4e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 298324 TGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACC 298383 ||| || ||||| || | || ||||||||||||||||| || ||||| |||||||| Sbjct 391624 TGCTTCACGGACGTTGAGAAGCTTTCCACGAAGAGGGAAGACGCCATAGTGGTCGCGACC 391565 Query 298384 GACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAG 298443 ||| ||||| || || | || ||| || | |||||||| || || |||| |||||| Sbjct 391564 GACGACGGAAAGACCCGAGACTGCCAGAGCTTTGGCGGAATCTCCTTCTGTCAAAATGAG 391505 Query 298444 AGTGCA 298449 ||||| Sbjct 391504 GGTGCA 391499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879533688550