Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 5e-14 >seq6 Length=1191995 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 154946 CAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAA 155005 |||||| |||||||| || |||||||| || || || ||||| ||||| || | | || Sbjct 823551 CAATGGAGGTCAGGTCTACCTTGATGGCGCCAACCTCAATGCCCAGGTTGGTTTGACCAA 823492 Query 155006 ACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCC 155065 || | | ||||||||||| ||||| | ||||| || || || ||| ||||||| Sbjct 823491 CCCTGGAACGGTCGGTGCAGATGTCTGTCACTTGAACTTGCACAAGACTTTCGGTATTCC 823432 Query 155066 ACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||||| || || || ||||| | ||||| || |||| Sbjct 823431 TCATGGTGGCGGTGGACCTGGGATTGGTCCCATTTGTGT 823393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212561074720