Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq6 109 6e-19 >seq6 Length=1191995 Score = 109 bits (120), Expect = 6e-19 Identities = 132/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 159604 TGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCA 159663 ||| | ||| |||| ||||| |||||||| || |||||||| || || || ||||| Sbjct 823568 TGTGACATTATTCACAGCAATGGAGGTCAGGTCTACCTTGATGGCGCCAACCTCAATGCC 823509 Query 159664 CAGGTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACA 159722 ||||| ||| | | || || || || | ||||||||||| ||||| | ||||| || Sbjct 823508 CAGGTTGGTTTGACCAACCC-TGGAACGGTCGGTGCAGATGTCTGTCACTTGAACTTGCA 823450 Query 159723 TAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||| ||| ||||||| ||||| || || || ||||| | ||||| ||| |||| Sbjct 823449 CAAGACTTTCGGTATTCCTCATGGTGGCGGTGGACCTGGGATTGGTCCCATTTGTGT 823393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050957428880