Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 3e-13 >seq5 Length=1214282 Score = 89.7 bits (98), Expect = 3e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || || ||||| || |||| |||| | || | || || ||||| || ||||| || Sbjct 997637 TCCTTTTGGATGTTGTAATCCGCAAGGGTGCGACCGTCTTCAAGCTGCTTGCCGGCGAAG 997696 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 997697 ATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTG 997756 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | ||| ||||| || |||||||| ||||| || Sbjct 997757 TCGATCGTGTCCGAAGACTCGACCTCCAAGGTGATGGTCTTACCCGTGAGGGTCTTGACG 997816 Query 34971 AAGATCTGCATATT 34984 || |||||||| || Sbjct 997817 AAAATCTGCATGTT 997830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633469436424