Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq14 93.3 3e-13 >seq14 Length=578605 Score = 93.3 bits (102), Expect = 3e-13 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 550046 GGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCT 550105 |||||||| || ||||||||||| |||||||| ||||||| ||||| |||| || | Sbjct 60339 GGTAAAGTCGAGATTATTGCCAACGATCAAGGAAACAGAATCACTCCTTCTTGGGTCGCG 60280 Query 550106 TTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCT 550165 ||||| || || | |||||| || || ||||| | ||||| || ||| ||| Sbjct 60279 TTCACAGATGAAGAGCGTTTAGTCGGAGAGAGTGCAAAGAACCAAGCACCTTCTAACCCT 60220 Query 550166 ACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGA-AGTTTTAATGATTCGACTGT 550224 |||| ||| | || || || || || || || || ||| |||||| | || ||| ||| Sbjct 60219 TCCAACACTGTATTCGACGCCAAGCGATTGATCGGTAGACAGTTTTCA-GACTCGGATGT 60161 Query 550225 TCA 550227 ||| Sbjct 60160 TCA 60158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029294254811170