Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq7 159 6e-34 >seq7 Length=1099351 Score = 159 bits (176), Expect = 6e-34 Identities = 295/426 (69%), Gaps = 10/426 (2%) Strand=Plus/Minus Query 25618 TCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTG 25677 ||||||||||| || ||||| || || |||| | || | || ||||| | | Sbjct 134806 TCTGATGGTATCGTCAACGAAAACCTCGTCGAGCGCTTTTCAGCCGAGGTGCAATGTGCC 134747 Query 25678 GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTAT 25737 ||||||||||| ||||| || |||||||| || || || | |||||||| || Sbjct 134746 GAGGCCAAGTGCTTCTATGGCTTCCAGATCATGATGGAGAACATCCACTCTGAAACCTAC 134687 Query 25738 GCCAAGCTTCTGATG---ACGTACATTACAGACGTCGC-CGAGAGAGATCGGCTGTTTGG 25793 || || |||| || ||||| | ||| ||| || | | || || | Sbjct 134686 TCC---CTCTTGATCGACACCTACATCAAGGACCCCGCTCGCCGCACCTAC-CTCTTCGA 134631 Query 25794 TGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAA 25853 ||||| || ||| ||| ||||| | ||||| ||||| | ||||||| Sbjct 134630 AGCCATTGACACCATCCCCTGCATCCGCAAAAAGGCCGACTGGGCTCTTCGTTGGATCAC 134571 Query 25854 CAGCCA-GAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCT 25912 | | | ||| | ||||||| |||||| ||| | || ||||| || || |||||||||| Sbjct 134570 CGACGACGAGTCC-ACGTTTGCCGAGCGCCTGATTGCTTTTGCCGCCGTCGAGGGCATCT 134512 Query 25913 TTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGC 25972 | ||| || || ||||| ||||||||||||||||| || ||| ||||||||||| Sbjct 134511 TCTTCTCTGGCTCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGGCTCATGCCCGGGC 134452 Query 25973 TGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCC 26032 | ||||||||||||||||||| | | ||||| |||||||||| || |||||||||| Sbjct 134451 TCACCTTTTCCAACGAGCTCATCTCCCGTGACGAAGGTCTCCACACCGACTTTGCCTGCC 134392 Query 26033 TGCTCT 26038 | |||| Sbjct 134391 TCCTCT 134386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844416851520